DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSTPGLS
Uniprot ID:
Q14C86
Source protein:
GTPase-activating protein and VPS9 domain-containing protein 1
Source gene:
GAPVD1
Class:
DEG_SCF_FBW7_1
Location:
760:766
E3 ligase:
FBXW7
DEGRON score:
0.9956
ASA_SCORE:
82.5857
COIL:
0.9373
CONS_SCORE:
0.3642
DSS_SCORE:
0.5608
HELIX:
0.0437
FCONS_SCORE:
1.0009
RIG_SCORE:
0.6265
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R759S
TCGA-05-4396
LUAD
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.R759S
DO23838
LUAD
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.R754M
TCGA-55-7995
LUAD
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.1667
p.R754M
DO45323
LUAD
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.1667
p.G764V
TCGA-75-5146
LUAD
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.6421
p.G764V
DO25228
LUAD
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.6421
p.R759C
TCGA-AA-3956
COAD
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.R759C
DO9700
COAD
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.R759C
SIDM00215
Colorectal Carcinoma
GDSC
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.R759C
SNU-283
large_intestine
COSMIC
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.G770S
TCGA-B5-A0K2
UCEC
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.2222
p.G770S
DO43835
UCEC
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.2222
p.D752H
TCGA-CG-4443
STAD
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.1111
p.D752H
DO38779
STAD
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.1111
p.R754S
TCGA-O8-A75V
LIHC
TCGA
PSTPGLS
DEG_SCF_FBW7_1
0.1667
p.R754S
DO49716
LIHC
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.1667
p.D750Y
DO229029
LICA
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.0556
p.V767F
DO229028
LICA
ICGC
PSTPGLS
DEG_SCF_FBW7_1
0.3056
p.T751M
SIDM02013
Colorectal Carcinoma
GDSC
PSTPGLS
DEG_SCF_FBW7_1
0.0833
p.E776K
SIDM01007
T-Lymphoblastic Leukemia
GDSC
PSTPGLS
DEG_SCF_FBW7_1
0.0556
p.E776K
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PSTPGLS
DEG_SCF_FBW7_1
0.0556
p.D771E
ACH-000721
Breast Cancer
CCLE
PSTPGLS
DEG_SCF_FBW7_1
0.1944
p.E755K
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PSTPGLS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with GAPVD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSTPGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14C86
GTPase-activating protein and VPS9 domain-containing protein 1
DEG_SCF_FBW7_1
760:766
PSTPGLS
FBXW7
0.9956
More...
Q6P1X5
Transcription initiation factor TFIID subunit 2
DEG_SCF_FBW7_1
1068:1074
PSTPGLS
FBXW7
0.997
More...