DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPALS
Uniprot ID:
O14559
Source protein:
Rho GTPase-activating protein 33
Source gene:
ARHGAP33
Class:
DEG_SCF_FBW7_1
Location:
822:827
E3 ligase:
FBXW7
DEGRON score:
0.9733
ASA_SCORE:
85.45
COIL:
0.9627
CONS_SCORE:
0.359
DSS_SCORE:
0.5631
HELIX:
0.014
FCONS_SCORE:
1.0205
RIG_SCORE:
0.6577
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A836P
TCGA-20-1685
OV
TCGA
PTPALS
DEG_SCF_FBW7_1
0.0833
p.L818R
TCGA-69-8255
LUAD
TCGA
PTPALS
DEG_SCF_FBW7_1
0.2222
p.D815Y
TCGA-AA-3955
COAD
TCGA
PTPALS
DEG_SCF_FBW7_1
0.1389
p.R823Q
TCGA-B5-A11Z
UCEC
TCGA
PTPALS
DEG_SCF_FBW7_1
0.7329
p.R823Q
SIDM00525
Osteosarcoma
GDSC
PTPALS
DEG_SCF_FBW7_1
0.7329
p.R823Q
ACH-000359
Bone Cancer
CCLE
PTPALS
DEG_SCF_FBW7_1
0.7329
p.R823Q
MG-63
bone
COSMIC
PTPALS
DEG_SCF_FBW7_1
0.7329
p.S814G
TCGA-EE-A2MT
SKCM
TCGA
PTPALS
DEG_SCF_FBW7_1
0.1111
p.R820M
TCGA-EO-A22R
UCEC
TCGA
PTPALS
DEG_SCF_FBW7_1
0.2778
p.S813N
DO222794
COCA
ICGC
PTPALS
DEG_SCF_FBW7_1
0.0833
p.G824A
DO229005
COCA
ICGC
PTPALS
DEG_SCF_FBW7_1
0.754
p.S831I
DO50733
ORCA
ICGC
PTPALS
DEG_SCF_FBW7_1
0.2222
p.R830Q
DO232040
ORCA
ICGC
PTPALS
DEG_SCF_FBW7_1
0.25
p.G829E
DO37130
READ
ICGC
PTPALS
DEG_SCF_FBW7_1
0.2778
p.R833C
DO43843
UCEC
ICGC
PTPALS
DEG_SCF_FBW7_1
0.1667
p.N818H
H2369
pleura
COSMIC
PTPALS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with ARHGAP33 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPALS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14559
Rho GTPase-activating protein 33
DEG_SCF_FBW7_1
822:827
PTPALS
FBXW7
0.9733
More...
Q16891
MICOS complex subunit MIC60
DEG_SCF_FBW7_1
181:186
PTPALS
FBXW7
0.9922
More...