DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPATS
Uniprot ID:
Q6ZRI6
Source protein:
Uncharacterized protein C15orf39
Source gene:
C15orf39
Class:
DEG_SCF_FBW7_1
Location:
989:994
E3 ligase:
FBXW7
DEGRON score:
0.9207
ASA_SCORE:
87.2667
COIL:
0.9573
CONS_SCORE:
0.3147
DSS_SCORE:
0.6905
HELIX:
0.0202
FCONS_SCORE:
0.8486
RIG_SCORE:
0.5757
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G999S
TCGA-32-1977
GBM
TCGA
PTPATS
DEG_SCF_FBW7_1
0.1944
p.G999S
DO12076
GBM
ICGC
PTPATS
DEG_SCF_FBW7_1
0.1944
p.A979T
TCGA-DI-A1BU
UCEC
TCGA
PTPATS
DEG_SCF_FBW7_1
0.0556
p.A979T
DO42023
UCEC
ICGC
PTPATS
DEG_SCF_FBW7_1
0.0556
p.P991T
TCGA-EE-A2MD
SKCM
TCGA
PTPATS
DEG_SCF_FBW7_1
0.7031
p.P991T
DO37851
SKCM
ICGC
PTPATS
DEG_SCF_FBW7_1
0.7031
p.P991L
TCGA-YD-A9TA
SKCM
TCGA
PTPATS
DEG_SCF_FBW7_1
0.7582
p.P991L
DO219503
SKCM
ICGC
PTPATS
DEG_SCF_FBW7_1
0.7582
p.P991H
DO233882
GACA
ICGC
PTPATS
DEG_SCF_FBW7_1
0.7694
p.P991H
ACH-000548
Head and Neck Cancer
CCLE
PTPATS
DEG_SCF_FBW7_1
0.7694
p.G999D
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PTPATS
DEG_SCF_FBW7_1
0.1944
p.G999D
ACH-000995
Leukemia
CCLE
PTPATS
DEG_SCF_FBW7_1
0.1944
p.A992V
ACH-001028
Rhabdoid
CCLE
PTPATS
DEG_SCF_FBW7_1
0.5825
Drug responses associated with C15orf39 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPATS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SCF_FBW7_1
1000:1005
PTPATS
FBXW7
0.9911
More...
Q6ZRI6
Uncharacterized protein C15orf39
DEG_SCF_FBW7_1
989:994
PTPATS
FBXW7
0.9207
More...