DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPATS
Uniprot ID:
Q7Z6B7
Source protein:
SLIT-ROBO Rho GTPase-activating protein 1
Source gene:
SRGAP1
Class:
DEG_SCF_FBW7_1
Location:
1000:1005
E3 ligase:
FBXW7
DEGRON score:
0.9911
ASA_SCORE:
86.85
COIL:
0.9527
CONS_SCORE:
0.2991
DSS_SCORE:
0.6437
HELIX:
0.023
FCONS_SCORE:
0.9256
RIG_SCORE:
0.6166
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E994D
TCGA-77-8143
LUSC
TCGA
PTPATS
DEG_SCF_FBW7_1
0.1667
p.S999Y
TCGA-A5-A0G2
UCEC
TCGA
PTPATS
DEG_SCF_FBW7_1
0.75
p.S999Y
DO41235
UCEC
ICGC
PTPATS
DEG_SCF_FBW7_1
0.75
p.P1002T
TCGA-A6-6781
COAD
TCGA
PTPATS
DEG_SCF_FBW7_1
0.7031
p.S1008F
TCGA-AX-A05Z
UCEC
TCGA
PTPATS
DEG_SCF_FBW7_1
0.6944
p.P1011H
TCGA-D9-A149
SKCM
TCGA
PTPATS
DEG_SCF_FBW7_1
0.1667
p.G1007V
DO51878
BLCA
ICGC
PTPATS
DEG_SCF_FBW7_1
0.2778
p.N998K
DO233734
GACA
ICGC
PTPATS
DEG_SCF_FBW7_1
0.2778
p.N1003D
DO233820
GACA
ICGC
PTPATS
DEG_SCF_FBW7_1
0.6932
p.N1003H
DO220359
KICH
ICGC
PTPATS
DEG_SCF_FBW7_1
0.7423
p.P1010S
DO46779
PAEN
ICGC
PTPATS
DEG_SCF_FBW7_1
0.6389
p.G1007A
DoTc2-4510
cervix
COSMIC
PTPATS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with SRGAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPATS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SCF_FBW7_1
1000:1005
PTPATS
FBXW7
0.9911
More...
Q6ZRI6
Uncharacterized protein C15orf39
DEG_SCF_FBW7_1
989:994
PTPATS
FBXW7
0.9207
More...