DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PTPGLS
Uniprot ID:
Q9UL45
Source protein:
Biogenesis of lysosome-related organelles complex 1 subunit 6
Source gene:
BLOC1S6
Class:
DEG_SCF_FBW7_1
Location:
25:30
E3 ligase:
FBXW7
DEGRON score:
0.8922
ASA_SCORE:
72.25
COIL:
0.8358
CONS_SCORE:
0.3329
DSS_SCORE:
0.7225
HELIX:
0.0482
FCONS_SCORE:
0.8781
RIG_SCORE:
0.6047
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L20M
TCGA-AP-A1DK
UCEC
TCGA
PTPGLS
DEG_SCF_FBW7_1
0.1944
p.L20M
DO42033
UCEC
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.1944
p.E40K
TCGA-BR-A4QL
STAD
TCGA
PTPGLS
DEG_SCF_FBW7_1
0.0556
p.I39V
TCGA-D1-A17Q
UCEC
TCGA
PTPGLS
DEG_SCF_FBW7_1
0.0833
p.D35N
TCGA-FD-A3SO
BLCA
TCGA
PTPGLS
DEG_SCF_FBW7_1
0.1944
p.D35N
DO569
BLCA
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.1944
p.L38S
DO219738
CESC
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.1111
p.C19F
DO228978
LICA
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.1667
p.S30R
DO228418
MALY
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.7427
p.C19S
DO52126
PAEN
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.1667
p.V39A
DO41871
UCEC
ICGC
PTPGLS
DEG_SCF_FBW7_1
0.0833
p.G28S
SIDM01314
Colorectal Carcinoma
GDSC
PTPGLS
DEG_SCF_FBW7_1
0.5882
p.R22K
ACH-000541
Myeloma
CCLE
PTPGLS
DEG_SCF_FBW7_1
0.25
p.E31K
TT
thyroid
COSMIC
PTPGLS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with BLOC1S6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0D5
Protein TANC1
DEG_SCF_FBW7_1
1446:1451
PTPGLS
FBXW7
0.9762
More...
Q9UL45
Biogenesis of lysosome-related organelles complex 1 subunit 6
DEG_SCF_FBW7_1
25:30
PTPGLS
FBXW7
0.8922
More...