DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPLS
Uniprot ID:
Q9GZR1
Source protein:
Sentrin-specific protease 6
Source gene:
SENP6
Class:
DEG_SCF_FBW7_1
Location:
216:221
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
88.85
COIL:
0.97
CONS_SCORE:
0.2898
DSS_SCORE:
0.5262
HELIX:
0.016
FCONS_SCORE:
0.9816
RIG_SCORE:
0.6345
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S212N
TCGA-A5-A0G2
UCEC
TCGA
PTPPLS
DEG_SCF_FBW7_1
0.2222
p.H210Y
TCGA-B5-A3FA
UCEC
TCGA
PTPPLS
DEG_SCF_FBW7_1
0.1667
p.R209L
TCGA-D3-A2JN
SKCM
TCGA
PTPPLS
DEG_SCF_FBW7_1
0.1389
p.D226Y
DO223046
ESCA
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.6389
p.Q208K
DO233852
GACA
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.2222
p.L224F
DO228297
LICA
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.6944
p.Q208H
DO228948
LICA
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.2222
p.C220F
DO229029
LICA
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.7108
p.F230V
DO36556
READ
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.0833
p.R229I
DO42312
UCEC
ICGC
PTPPLS
DEG_SCF_FBW7_1
0.1111
p.Q206R
SIDM00433
T-Lymphoblastic Leukemia
GDSC
PTPPLS
DEG_SCF_FBW7_1
0.0556
p.Q206R
SIDM01000
Melanoma
GDSC
PTPPLS
DEG_SCF_FBW7_1
0.0556
p.R209Q
SIDM00500
Colorectal Carcinoma
GDSC
PTPPLS
DEG_SCF_FBW7_1
0.1389
p.R209Q
ACH-000959
Colon/Colorectal Cancer
CCLE
PTPPLS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with SENP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
B2RTY4
Unconventional myosin-IXa
DEG_SCF_FBW7_1
1806:1811
PTPPLS
FBXW7
0.9982
More...
Q9GZR1
Sentrin-specific protease 6
DEG_SCF_FBW7_1
216:221
PTPPLS
FBXW7
0.9982
More...