DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPSIT
Uniprot ID:
A8MWE9
Source protein:
EF-hand calcium-binding domain-containing protein 8
Source gene:
EFCAB8
Class:
DEG_SCF_FBW7_1
Location:
30:35
E3 ligase:
FBXW7
DEGRON score:
0.9441
ASA_SCORE:
82.4
COIL:
0.9317
CONS_SCORE:
0.1625
DSS_SCORE:
0.5842
HELIX:
0.0268
FCONS_SCORE:
0.9696
RIG_SCORE:
0.6479
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R43M
DO233652
GACA
ICGC
PTPSIT
DEG_SCF_FBW7_1
0.1111
p.S28I
DO228952
LICA
ICGC
PTPSIT
DEG_SCF_FBW7_1
0.2778
p.P29S
DO222402
MELA
ICGC
PTPSIT
DEG_SCF_FBW7_1
0.3056
p.S29F
DO222710
MELA
ICGC
PTPSIT
DEG_SCF_FBW7_1
0.3056
p.S29F
ACH-001566
Skin Cancer
CCLE
PTPSIT
DEG_SCF_FBW7_1
0.3056
p.I34T
SIDM00517
Head and Neck Carcinoma
GDSC
PTPSIT
DEG_SCF_FBW7_1
0.5966
p.I34T
ACH-002239
Head and Neck Cancer
CCLE
PTPSIT
DEG_SCF_FBW7_1
0.5966
p.I34T
H3118
upper_aerodigestive_tract
COSMIC
PTPSIT
DEG_SCF_FBW7_1
0.5966
Drug responses associated with EFCAB8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPSIT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZN04
RNA-binding protein MEX3B
DEG_SCF_FBW7_1
268:273
PTPSIT
FBXW7
0.9969
More...
A8MWE9
EF-hand calcium-binding domain-containing protein 8
DEG_SCF_FBW7_1
30:35
PTPSIT
FBXW7
0.9441
More...