DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPSPS
Uniprot ID:
Q14693
Source protein:
Phosphatidate phosphatase LPIN1
Source gene:
LPIN1
Class:
DEG_SCF_FBW7_1
Location:
238:243
E3 ligase:
FBXW7
DEGRON score:
0.9915
ASA_SCORE:
78.55
COIL:
0.9492
CONS_SCORE:
0.266
DSS_SCORE:
0.7322
HELIX:
0.0192
FCONS_SCORE:
0.9901
RIG_SCORE:
0.5073
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E234K
TCGA-AP-A0LM
UCEC
TCGA
PTPSPS
DEG_SCF_FBW7_1
0.2222
p.E234K
TCGA-EO-A22X
UCEC
TCGA
PTPSPS
DEG_SCF_FBW7_1
0.2222
p.E242K
TCGA-AX-A06F
UCEC
TCGA
PTPSPS
DEG_SCF_FBW7_1
0.7022
p.L250P
TCGA-DW-7834
KIRP
TCGA
PTPSPS
DEG_SCF_FBW7_1
0.1389
p.L250F
TCGA-WE-A8K4
SKCM
TCGA
PTPSPS
DEG_SCF_FBW7_1
0.1389
p.G244S
DO19793
KIRC
ICGC
PTPSPS
DEG_SCF_FBW7_1
0.3056
p.P242S
DO229050
LICA
ICGC
PTPSPS
DEG_SCF_FBW7_1
0.5641
p.E235D
DO223923
LIHC
ICGC
PTPSPS
DEG_SCF_FBW7_1
0.25
p.P250S
DO48665
SKCM
ICGC
PTPSPS
DEG_SCF_FBW7_1
0.1389
p.S252R
DO41331
UCEC
ICGC
PTPSPS
DEG_SCF_FBW7_1
0.5278
p.S237L
SIDM00777
Colorectal Carcinoma
GDSC
PTPSPS
DEG_SCF_FBW7_1
0.3056
p.S237L
NCI-H508
large_intestine
COSMIC
PTPSPS
DEG_SCF_FBW7_1
0.3056
p.S246N
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
PTPSPS
DEG_SCF_FBW7_1
0.25
p.S246N
KYSE-70
oesophagus
COSMIC
PTPSPS
DEG_SCF_FBW7_1
0.25
p.D231N
ACH-000445
Brain Cancer
CCLE
PTPSPS
DEG_SCF_FBW7_1
0.1389
p.N234T
ACH-000996
Endometrial/Uterine Cancer
CCLE
PTPSPS
DEG_SCF_FBW7_1
0.2222
p.A228T
ACH-002232
Lymphoma
CCLE
PTPSPS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with LPIN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPSPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14693
Phosphatidate phosphatase LPIN1
DEG_SCF_FBW7_1
238:243
PTPSPS
FBXW7
0.9915
More...
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SCF_FBW7_1
792:797
PTPSPS
FBXW7
0.981
More...