DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPSSS
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_SCF_FBW7_1
Location:
3910:3915
E3 ligase:
FBXW7
DEGRON score:
0.9421
ASA_SCORE:
60.4667
COIL:
0.8648
CONS_SCORE:
0.5134
DSS_SCORE:
0.5498
HELIX:
0.0613
FCONS_SCORE:
0.9845
RIG_SCORE:
0.6632
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T3901I
TCGA-34-2600
LUSC
TCGA
PTPSSS
DEG_SCF_FBW7_1
0.0833
p.T3901I
DO27081
LUSC
ICGC
PTPSSS
DEG_SCF_FBW7_1
0.0833
p.S3914I
TCGA-B5-A1MY
UCEC
TCGA
PTPSSS
DEG_SCF_FBW7_1
0.623
p.R3902Q
TCGA-B5-A3FA
UCEC
TCGA
PTPSSS
DEG_SCF_FBW7_1
0.1111
p.E3920A
TCGA-BS-A0UA
UCEC
TCGA
PTPSSS
DEG_SCF_FBW7_1
0.1944
p.P3911L
TCGA-D3-A8GN
SKCM
TCGA
PTPSSS
DEG_SCF_FBW7_1
0.7582
p.P3911L
DO51240
SKCM
ICGC
PTPSSS
DEG_SCF_FBW7_1
0.7582
p.S3922R
TCGA-EY-A215
UCEC
TCGA
PTPSSS
DEG_SCF_FBW7_1
0.1389
p.R3903I
DO228944
LICA
ICGC
PTPSSS
DEG_SCF_FBW7_1
0.1389
p.S3912A
DO229268
THCA
ICGC
PTPSSS
DEG_SCF_FBW7_1
0.7588
p.V3916A
DO50078
UCEC
ICGC
PTPSSS
DEG_SCF_FBW7_1
0.3056
p.N3922D
SIDM00951
T-Lymphoblastic Leukemia
GDSC
PTPSSS
DEG_SCF_FBW7_1
0.1389
p.N3922D
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPSSS
DEG_SCF_FBW7_1
0.1389
p.T3925P
ACH-002278
Neuroblastoma
CCLE
PTPSSS
DEG_SCF_FBW7_1
0.0556
p.V3921A
LNCaP-Clone-FGC
prostate
COSMIC
PTPSSS
DEG_SCF_FBW7_1
0.1667
p.S3913A
KYSE-450
oesophagus
COSMIC
PTPSSS
DEG_SCF_FBW7_1
0.6477
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P61964
WD repeat-containing protein 5
DEG_SCF_FBW7_1
17:22
PTPSSS
FBXW7
0.8022
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SCF_FBW7_1
3910:3915
PTPSSS
FBXW7
0.9421
More...