DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTAT
Uniprot ID:
P37198
Source protein:
Nuclear pore glycoprotein p62
Source gene:
NUP62
Class:
DEG_SCF_FBW7_1
Location:
208:213
E3 ligase:
FBXW7
DEGRON score:
0.9942
ASA_SCORE:
78.55
COIL:
0.8915
CONS_SCORE:
0.3579
DSS_SCORE:
0.5956
HELIX:
0.0377
FCONS_SCORE:
0.8819
RIG_SCORE:
0.7079
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I214V
TCGA-56-5897
LUSC
TCGA
PTPTAT
DEG_SCF_FBW7_1
0.3056
p.I214V
DO26453
LUSC
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.3056
p.A223E
TCGA-AA-A01R
COAD
TCGA
PTPTAT
DEG_SCF_FBW7_1
0.0556
p.A223E
DO7934
COAD
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.0556
p.A212V
TCGA-AB-2828
LAML
TCGA
PTPTAT
DEG_SCF_FBW7_1
0.5825
p.A212V
DO21571
LAML
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.5825
p.Q204R
TCGA-CC-A5UD
LIHC
TCGA
PTPTAT
DEG_SCF_FBW7_1
0.2222
p.Q204R
DO219552
LIHC
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.2222
p.G218E
TCGA-EB-A3XD
SKCM
TCGA
PTPTAT
DEG_SCF_FBW7_1
0.1944
p.G218E
DO37871
SKCM
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.1944
p.A212T
TCGA-EY-A215
UCEC
TCGA
PTPTAT
DEG_SCF_FBW7_1
0.6028
p.A212T
DO42665
UCEC
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.6028
p.G201V
DO229053
LICA
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.1389
p.A212G
DO233293
NACA
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.6429
p.A223V
DO233294
NACA
ICGC
PTPTAT
DEG_SCF_FBW7_1
0.0556
p.A223V
SIDM00217
Colorectal Carcinoma
GDSC
PTPTAT
DEG_SCF_FBW7_1
0.0556
p.A223V
ACH-000999
Colon/Colorectal Cancer
CCLE
PTPTAT
DEG_SCF_FBW7_1
0.0556
p.A223V
SNU-1040
large_intestine
COSMIC
PTPTAT
DEG_SCF_FBW7_1
0.0556
p.S216N
SIDM00491
Thyroid Gland Carcinoma
GDSC
PTPTAT
DEG_SCF_FBW7_1
0.25
p.S216N
ACH-001443
Thyroid Cancer
CCLE
PTPTAT
DEG_SCF_FBW7_1
0.25
p.S216N
ASH-3
thyroid
COSMIC
PTPTAT
DEG_SCF_FBW7_1
0.25
p.F222S
SIDM00785
Acute Myeloid Leukemia
GDSC
PTPTAT
DEG_SCF_FBW7_1
0.0833
p.F222S
KG-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPTAT
DEG_SCF_FBW7_1
0.0833
p.L221F
ACH-001521
Skin Cancer
CCLE
PTPTAT
DEG_SCF_FBW7_1
0.1111
Drug responses associated with NUP62 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P37198
Nuclear pore glycoprotein p62
DEG_SCF_FBW7_1
208:213
PTPTAT
FBXW7
0.9942
More...
Q702N8
Xin actin-binding repeat-containing protein 1
DEG_SCF_FBW7_1
1080:1085
PTPTAT
FBXW7
0.7998
More...