DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPTPT
Uniprot ID:
P40225
Source protein:
Thrombopoietin
Source gene:
THPO
Class:
DEG_SCF_FBW7_1
Location:
330:335
E3 ligase:
FBXW7
DEGRON score:
0.8777
ASA_SCORE:
88.0167
COIL:
0.9558
CONS_SCORE:
0.438
DSS_SCORE:
0.6872
HELIX:
0.015
FCONS_SCORE:
0.8417
RIG_SCORE:
0.5967
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L338F
TCGA-78-8662
LUAD
TCGA
PTPTPT
DEG_SCF_FBW7_1
0.25
p.L338F
DO45346
LUAD
ICGC
PTPTPT
DEG_SCF_FBW7_1
0.25
p.T331M
TCGA-BR-4292
STAD
TCGA
PTPTPT
DEG_SCF_FBW7_1
0.7423
p.T331M
DO38495
STAD
ICGC
PTPTPT
DEG_SCF_FBW7_1
0.7423
p.H345Q
DO229029
LICA
ICGC
PTPTPT
DEG_SCF_FBW7_1
0.0556
p.H345Q
SIDM01036
Plasma Cell Myeloma
GDSC
PTPTPT
DEG_SCF_FBW7_1
0.0556
p.H345Q
ACH-000653
Myeloma
CCLE
PTPTPT
DEG_SCF_FBW7_1
0.0556
p.H345Q
JJN-3
haematopoietic_and_lymphoid_tissue
COSMIC
PTPTPT
DEG_SCF_FBW7_1
0.0556
p.P330S
DO27943
ORCA
ICGC
PTPTPT
DEG_SCF_FBW7_1
0.6752
p.Y343D
DO46933
RECA
ICGC
PTPTPT
DEG_SCF_FBW7_1
0.1111
p.P330L
DO218861
SKCA
ICGC
PTPTPT
DEG_SCF_FBW7_1
0.6471
p.T344A
SIDM00087
Plasma Cell Myeloma
GDSC
PTPTPT
DEG_SCF_FBW7_1
0.0833
p.T344A
SIDM00863
Burkitt's Lymphoma
GDSC
PTPTPT
DEG_SCF_FBW7_1
0.0833
p.T344A
SIDM00808
Burkitt's Lymphoma
GDSC
PTPTPT
DEG_SCF_FBW7_1
0.0833
p.T344A
SIDM01254
Burkitt's Lymphoma
GDSC
PTPTPT
DEG_SCF_FBW7_1
0.0833
p.P325S
ACH-001791
Liposarcoma
CCLE
PTPTPT
DEG_SCF_FBW7_1
0.1944
p.H341Q
JJN-3
haematopoietic_and_lymphoid_tissue
COSMIC
PTPTPT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with THPO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPTPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40225
Thrombopoietin
DEG_SCF_FBW7_1
330:335
PTPTPT
FBXW7
0.8777
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SCF_FBW7_1
863:868
PTPTPT
FBXW7
0.6646
More...