DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTTPEPT
Uniprot ID:
P07359
Source protein:
Platelet glycoprotein Ib alpha chain
Source gene:
GP1BA
Class:
DEG_SCF_FBW7_1
Location:
421:427
E3 ligase:
FBXW7
DEGRON score:
0.9819
ASA_SCORE:
90.6571
COIL:
0.9437
CONS_SCORE:
0.4532
DSS_SCORE:
0.9019
HELIX:
0.01
FCONS_SCORE:
1.2687
RIG_SCORE:
0.4537
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P411T
TCGA-26-5139
GBM
TCGA
PTTPEPT
DEG_SCF_FBW7_1
0.0556
p.P411T
DO12358
GBM
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.0556
p.A418T
TCGA-FP-A4BF
STAD
TCGA
PTTPEPT
DEG_SCF_FBW7_1
0.25
p.A418T
DO47775
STAD
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.25
p.A418T
SIDM00150
Colorectal Carcinoma
GDSC
PTTPEPT
DEG_SCF_FBW7_1
0.25
p.A418T
KM12
large_intestine
COSMIC
PTTPEPT
DEG_SCF_FBW7_1
0.25
p.S415P
DO228947
LICA
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.1667
p.S415P
DO229216
THCA
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.1667
p.A418P
DO229264
THCA
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.25
p.S420R
DO229234
THCA
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.3056
p.S428P
DO229242
THCA
ICGC
PTTPEPT
DEG_SCF_FBW7_1
0.3056
p.P411L
SIDM01591
Breast Carcinoma
GDSC
PTTPEPT
DEG_SCF_FBW7_1
0.0556
p.P411L
ACH-000540
Non-Cancerous
CCLE
PTTPEPT
DEG_SCF_FBW7_1
0.0556
p.P411L
ACH-001389
Breast Cancer
CCLE
PTTPEPT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with GP1BA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTPEPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07359
Platelet glycoprotein Ib alpha chain
DEG_SCF_FBW7_1
421:427
PTTPEPT
FBXW7
0.9819
More...
P07359
Platelet glycoprotein Ib alpha chain
DEG_SCF_FBW7_1
434:440
PTTPEPT
FBXW7
0.7405
More...
P07359
Platelet glycoprotein Ib alpha chain
DEG_SCF_FBW7_1
447:453
PTTPEPT
FBXW7
0.9405
More...