DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVTPKPT
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_SCF_FBW7_1
Location:
1341:1347
E3 ligase:
FBXW7
DEGRON score:
0.9988
ASA_SCORE:
100.7714
COIL:
0.966
CONS_SCORE:
0.2454
DSS_SCORE:
0.7539
HELIX:
0.012
FCONS_SCORE:
1.164
RIG_SCORE:
0.6393
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1344T
TCGA-A6-5665
COAD
TCGA
PVTPKPT
DEG_SCF_FBW7_1
0.7031
p.S1353N
TCGA-AX-A1CE
UCEC
TCGA
PVTPKPT
DEG_SCF_FBW7_1
0.1667
p.T1347I
TCGA-B5-A1MX
UCEC
TCGA
PVTPKPT
DEG_SCF_FBW7_1
0.8189
p.S1341C
DO856
BLCA
ICGC
PVTPKPT
DEG_SCF_FBW7_1
0.7541
p.R1331W
DO6323
CESC
ICGC
PVTPKPT
DEG_SCF_FBW7_1
0.0556
p.C1335G
DO224664
COCA
ICGC
PVTPKPT
DEG_SCF_FBW7_1
0.1667
p.V1342F
DO220468
KICH
ICGC
PVTPKPT
DEG_SCF_FBW7_1
0.5957
p.R1339W
DO52256
LIHC
ICGC
PVTPKPT
DEG_SCF_FBW7_1
0.2778
p.R1331Q
DO220885
MELA
ICGC
PVTPKPT
DEG_SCF_FBW7_1
0.0556
p.T1355K
SIDM01056
Breast Carcinoma
GDSC
PVTPKPT
DEG_SCF_FBW7_1
0.1111
p.T1355K
EFM-19
breast
COSMIC
PVTPKPT
DEG_SCF_FBW7_1
0.1111
p.P1341T
SIDM01526
Mesothelioma
GDSC
PVTPKPT
DEG_SCF_FBW7_1
0.7031
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTPKPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1136:1142
PVTPKPT
FBXW7
0.9837
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1300:1306
PVTPKPT
FBXW7
0.9946
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1341:1347
PVTPKPT
FBXW7
0.9988
More...