DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYLTPSPE
Uniprot ID:
Q04721
Source protein:
Neurogenic locus notch homolog protein 2
Source gene:
NOTCH2
Class:
DEG_SCF_FBW7_2
Location:
2413:2420
E3 ligase:
FBXW7
DEGRON score:
0.9375
ASA_SCORE:
50.55
COIL:
0.9163
CONS_SCORE:
0.3875
DSS_SCORE:
0.7506
HELIX:
0.019
FCONS_SCORE:
1.0256
RIG_SCORE:
0.5785
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2421Y
TCGA-AX-A06F
UCEC
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.3056
p.S2421Y
DO41752
UCEC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.3056
p.S2427R
TCGA-DR-A0ZM
CESC
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.1389
p.S2427R
DO6254
CESC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.1389
p.P2422T
DO229384
BTCA
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.2778
p.S2428L
DO220851
MELA
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.1111
p.L2408H
SIDM00458
Acute Myeloid Leukemia
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.1944
p.L2408H
SIDM00422
Hodgkin's Lymphoma
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.1944
p.L2408H
SIDM00330
Neuroblastoma
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.1944
p.L2408H
SIDM01098
Neuroblastoma
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.1944
p.S2426L
SIDM00153
T-Lymphoblastic Leukemia
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with NOTCH2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYLTPSPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q04721
Neurogenic locus notch homolog protein 2
DEG_SCF_FBW7_2
2413:2420
PYLTPSPE
FBXW7
0.9375
More...
Q9UM47
Neurogenic locus notch homolog protein 3
DEG_SCF_FBW7_2
2243:2250
PYLTPSPE
FBXW7
0.9919
More...