DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYLTPSPE
Uniprot ID:
Q9UM47
Source protein:
Neurogenic locus notch homolog protein 3
Source gene:
NOTCH3
Class:
DEG_SCF_FBW7_2
Location:
2243:2250
E3 ligase:
FBXW7
DEGRON score:
0.9919
ASA_SCORE:
87.6
COIL:
0.9466
CONS_SCORE:
0.3703
DSS_SCORE:
0.5828
HELIX:
0.0205
FCONS_SCORE:
1.1116
RIG_SCORE:
0.5726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2234H
TCGA-A5-A1OF
UCEC
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.0833
p.R2234H
DO42568
UCEC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.0833
p.W2255R
TCGA-AX-A3FS
UCEC
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.1944
p.W2255R
DO40879
UCEC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.1944
p.P2252T
TCGA-EE-A3AB
SKCM
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.2778
p.P2252T
DO38057
SKCM
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.2778
p.E2250K
TCGA-EO-A22R
UCEC
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E2250K
TCGA-EO-A22X
UCEC
TCGA
PYLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E2250K
DO43907
UCEC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.7022
p.E2250K
DO42713
UCEC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.7022
p.A2256G
DO233722
GACA
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.1667
p.P2247Q
DO228948
LICA
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.7035
p.H2254Q
DO231839
LINC
ICGC
PYLTPSPE
DEG_SCF_FBW7_2
0.2222
p.R2234C
SIDM01269
Esophageal Carcinoma
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.0833
p.S2257I
SIDM00521
Small Cell Lung Carcinoma
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.1389
p.S2257I
ACH-000743
Lung Cancer
CCLE
PYLTPSPE
DEG_SCF_FBW7_2
0.1389
p.S2257I
COR-L95
lung
COSMIC
PYLTPSPE
DEG_SCF_FBW7_2
0.1389
p.P2247L
SIDM01608
Endometrial Carcinoma
GDSC
PYLTPSPE
DEG_SCF_FBW7_2
0.7582
p.P2247L
ACH-000990
Endometrial/Uterine Cancer
CCLE
PYLTPSPE
DEG_SCF_FBW7_2
0.7582
Drug responses associated with NOTCH3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYLTPSPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q04721
Neurogenic locus notch homolog protein 2
DEG_SCF_FBW7_2
2413:2420
PYLTPSPE
FBXW7
0.9375
More...
Q9UM47
Neurogenic locus notch homolog protein 3
DEG_SCF_FBW7_2
2243:2250
PYLTPSPE
FBXW7
0.9919
More...