DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYSTT
Uniprot ID:
Q9UI09
Source protein:
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Source gene:
NDUFA12
Class:
DEG_SPOP_SBC_1
Location:
126:130
E3 ligase:
SPOP
DEGRON score:
0.9202
ASA_SCORE:
65.22
COIL:
0.8868
CONS_SCORE:
0.4803
DSS_SCORE:
0.3901
HELIX:
0.0348
FCONS_SCORE:
1.0143
RIG_SCORE:
0.8156
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E122Q
TCGA-37-3792
LUSC
TCGA
PYSTT
DEG_SPOP_SBC_1
0.2222
p.E122Q
DO27192
LUSC
ICGC
PYSTT
DEG_SPOP_SBC_1
0.2222
p.V117L
TCGA-86-8358
LUAD
TCGA
PYSTT
DEG_SPOP_SBC_1
0.0833
p.V117L
DO25471
LUAD
ICGC
PYSTT
DEG_SPOP_SBC_1
0.0833
p.P140S
TCGA-BA-4075
HNSC
TCGA
PYSTT
DEG_SPOP_SBC_1
0.0556
p.P140S
DO15775
HNSC
ICGC
PYSTT
DEG_SPOP_SBC_1
0.0556
p.N116D
DO231939
LICA
ICGC
PYSTT
DEG_SPOP_SBC_1
0.0556
p.T129N
DO229041
LICA
ICGC
PYSTT
DEG_SPOP_SBC_1
0.7055
p.S128A
SIDM00922
Non-Small Cell Lung Carcinoma
GDSC
PYSTT
DEG_SPOP_SBC_1
0.7588
p.S128A
ACH-000392
Lung Cancer
CCLE
PYSTT
DEG_SPOP_SBC_1
0.7588
p.S128A
Calu-3
lung
COSMIC
PYSTT
DEG_SPOP_SBC_1
0.7588
Drug responses associated with NDUFA12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JK9
Mastermind-like protein 3
DEG_SPOP_SBC_1
860:864
PYSTT
SPOP
0.8405
More...
Q9UI09
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
DEG_SPOP_SBC_1
126:130
PYSTT
SPOP
0.9202
More...
Q8N402
Putative uncharacterized protein LOC388882
DEG_SPOP_SBC_1
24:28
PYSTT
SPOP
0.9972
More...