DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
QKENF
Uniprot ID:
P52756
Source protein:
RNA-binding protein 5
Source gene:
RBM5
Class:
DEG_APCC_KENBOX_2
Location:
554:558
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5123
ASA_SCORE:
95.04
COIL:
0.3962
CONS_SCORE:
0.3056
DSS_SCORE:
0.5316
HELIX:
0.5838
FCONS_SCORE:
1.003
RIG_SCORE:
0.7136
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L551F
TCGA-A1-A0SI
BRCA
TCGA
QKENF
DEG_APCC_KENBOX_2
0.25
p.L551F
DO1774
BRCA
ICGC
QKENF
DEG_APCC_KENBOX_2
0.25
p.R546H
TCGA-AX-A1CE
UCEC
TCGA
QKENF
DEG_APCC_KENBOX_2
0.1111
p.R546H
DO234171
ESAD
ICGC
QKENF
DEG_APCC_KENBOX_2
0.1111
p.R546H
DO42280
UCEC
ICGC
QKENF
DEG_APCC_KENBOX_2
0.1111
p.S550I
TCGA-B5-A3FC
UCEC
TCGA
QKENF
DEG_APCC_KENBOX_2
0.2222
p.S550I
DO41871
UCEC
ICGC
QKENF
DEG_APCC_KENBOX_2
0.2222
p.S567F
TCGA-BF-A5ES
SKCM
TCGA
QKENF
DEG_APCC_KENBOX_2
0.0833
p.S567F
DO219456
SKCM
ICGC
QKENF
DEG_APCC_KENBOX_2
0.0833
p.K559E
TCGA-D3-A3ML
SKCM
TCGA
QKENF
DEG_APCC_KENBOX_2
0.3056
p.K559E
DO47413
SKCM
ICGC
QKENF
DEG_APCC_KENBOX_2
0.3056
p.L568F
TCGA-DR-A0ZM
CESC
TCGA
QKENF
DEG_APCC_KENBOX_2
0.0556
p.L568F
DO6254
CESC
ICGC
QKENF
DEG_APCC_KENBOX_2
0.0556
p.S561N
SIDM01007
T-Lymphoblastic Leukemia
GDSC
QKENF
DEG_APCC_KENBOX_2
0.25
p.S561N
ACH-002256
Leukemia
CCLE
QKENF
DEG_APCC_KENBOX_2
0.25
p.S561N
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
QKENF
DEG_APCC_KENBOX_2
0.25
Drug responses associated with RBM5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QKENF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P52756
RNA-binding protein 5
DEG_APCC_KENBOX_2
554:558
QKENF
APC,CDC20,FZR1
0.5123
More...
Q8NEV8
Exophilin-5
DEG_APCC_KENBOX_2
1181:1185
QKENF
APC,CDC20,FZR1
0.8051
More...