DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RAGVYPE
Uniprot ID:
P50570
Source protein:
Dynamin-2
Source gene:
DNM2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
622:628
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9947
ASA_SCORE:
70.2429
COIL:
0.7001
CONS_SCORE:
0.6172
DSS_SCORE:
0.4454
HELIX:
0.1971
FCONS_SCORE:
1.4198
RIG_SCORE:
0.725
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E635K
TCGA-A2-A0CX
BRCA
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A638T
TCGA-AG-A002
READ
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V625I
TCGA-AJ-A3BH
UCEC
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.5965
p.P627H
TCGA-FS-A1ZK
SKCM
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6583
p.S619L
TCGA-FW-A3R5
SKCM
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.D612N
TCGA-GV-A3JZ
BLCA
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.W616C
TCGA-GV-A3JZ
BLCA
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.W612C
DO773
BLCA
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.E631K
DO2755
BRCA
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.S615L
DO221126
MALY
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1389
p.S615L
DO37406
SKCM
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1389
p.P623H
DO37474
SKCM
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.7694
p.V621I
DO41638
UCEC
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.A618T
SIDM00671
T-Cell Non-Hodgkin's Lymphoma
GDSC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.2222
p.A618T
HH
haematopoietic_and_lymphoid_tissue
COSMIC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.2222
p.G624A
SIDM00820
Kidney Carcinoma
GDSC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6429
p.G624A
RCC-ER
kidney
COSMIC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6429
p.A614T
ACH-000061
Lymphoma
CCLE
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.A614T
HH
haematopoietic_and_lymphoid_tissue
COSMIC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G620A
ACH-002188
Kidney Cancer
CCLE
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.2778
p.G620A
RCC-ER
kidney
COSMIC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with DNM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RAGVYPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P50570
Dynamin-2
LIG_APCC_ABBAyCdc20_2
622:628
RAGVYPE
APC,CDC20,FZR1
0.9947
More...
Q05193
Dynamin-1
LIG_APCC_ABBAyCdc20_2
622:628
RAGVYPE
APC,CDC20,FZR1
0.9707
More...