DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RAGVYPE
Uniprot ID:
Q05193
Source protein:
Dynamin-1
Source gene:
DNM1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
622:628
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9707
ASA_SCORE:
74.4
COIL:
0.6711
CONS_SCORE:
0.6503
DSS_SCORE:
0.3589
HELIX:
0.1074
FCONS_SCORE:
1.4584
RIG_SCORE:
0.7585
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y626F
TCGA-05-4397
LUAD
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6417
p.Y626F
DO25320
LUAD
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6417
p.A623D
TCGA-06-5416
GBM
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6682
p.A623D
DO10880
GBM
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.6682
p.E634D
TCGA-AA-A010
COAD
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E634D
TCGA-CA-6717
COAD
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E634D
DO8264
COAD
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E638K
TCGA-BQ-5886
KIRP
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.E638K
DO20901
KIRP
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.G631V
TCGA-EE-A2MD
SKCM
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.G631V
DO37851
SKCM
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.R622M
TCGA-ET-A39R
THCA
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.8632
p.R622M
DO39552
THCA
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.8632
p.S619F
TCGA-FW-A3R5
SKCM
TCGA
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.S619F
DO37406
SKCM
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.E612D
DO229031
LICA
ICGC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R629C
ACH-001061
Colon/Colorectal Cancer
CCLE
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E631D
SNU-81
large_intestine
COSMIC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.25
p.R634W
SNU-175
large_intestine
COSMIC
RAGVYPE
LIG_APCC_ABBAyCdc20_2
0.1667
Drug responses associated with DNM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RAGVYPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P50570
Dynamin-2
LIG_APCC_ABBAyCdc20_2
622:628
RAGVYPE
APC,CDC20,FZR1
0.9947
More...
Q05193
Dynamin-1
LIG_APCC_ABBAyCdc20_2
622:628
RAGVYPE
APC,CDC20,FZR1
0.9707
More...