DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RRRLFQE
Uniprot ID:
A6NEV1
Source protein:
Proline-rich protein 23A
Source gene:
PRR23A
Class:
LIG_APCC_ABBAyCdc20_2
Location:
260:266
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9828
ASA_SCORE:
117.4286
COIL:
0.4017
CONS_SCORE:
0.7839
DSS_SCORE:
0.9313
HELIX:
0.5567
FCONS_SCORE:
1.3927
RIG_SCORE:
0.747
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R260S
TCGA-AA-3877
COAD
TCGA
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7427
p.R260S
DO7855
COAD
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7427
p.R260H
TCGA-D1-A163
UCEC
TCGA
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R260H
DO41008
UCEC
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.8244
p.P252Q
TCGA-LN-A49Y
ESCA
TCGA
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R262L
TCGA-O2-A52V
LUSC
TCGA
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7316
p.R262L
DO219223
LUSC
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7316
p.P256L
TCGA-QC-A7B5
SARC
TCGA
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.2222
p.P256L
DO220239
SARC
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.2222
p.P252L
DO222860
COCA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R260C
DO233267
GACA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R260C
SIDM00006
Other Solid Cancers
GDSC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R260C
MCC26
skin
COSMIC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.8301
p.Q265K
DO229024
LICA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.5833
p.F264L
DO229041
LICA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.6981
p.P255S
DO222731
MELA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R254C
DO33016
PACA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1667
p.Q265H
DO232224
PBCA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.647
p.R254H
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R254H
ACH-000888
Lung Cancer
CCLE
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E266G
ACH-001197
Lymphoma
CCLE
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7199
Drug responses associated with PRR23A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRLFQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NEV1
Proline-rich protein 23A
LIG_APCC_ABBAyCdc20_2
260:266
RRRLFQE
APC,CDC20,FZR1
0.9828
More...
Q6ZRP0
Proline-rich protein 23C
LIG_APCC_ABBAyCdc20_2
256:262
RRRLFQE
APC,CDC20,FZR1
0.9818
More...