DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RRRLFQE
Uniprot ID:
Q6ZRP0
Source protein:
Proline-rich protein 23C
Source gene:
PRR23C
Class:
LIG_APCC_ABBAyCdc20_2
Location:
256:262
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9818
ASA_SCORE:
115.4429
COIL:
0.4344
CONS_SCORE:
0.7602
DSS_SCORE:
0.8918
HELIX:
0.4941
FCONS_SCORE:
1.2666
RIG_SCORE:
0.7648
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R250H
DO225232
BRCA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R258S
DO229045
LICA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.6316
p.L247I
DO23134
LINC
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R258H
DO52675
MALY
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7133
p.P251S
DO220853
MELA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.RP250RS
DO220853
MELA
ICGC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0
p.E249K
SIDM00080
Melanoma
GDSC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.E249K
ACH-000730
Skin Cancer
CCLE
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R258C
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.719
p.E262K
SIDM00909
Melanoma
GDSC
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E262K
ACH-000644
Skin Cancer
CCLE
RRRLFQE
LIG_APCC_ABBAyCdc20_2
0.7022
Drug responses associated with PRR23C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRLFQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NEV1
Proline-rich protein 23A
LIG_APCC_ABBAyCdc20_2
260:266
RRRLFQE
APC,CDC20,FZR1
0.9828
More...
Q6ZRP0
Proline-rich protein 23C
LIG_APCC_ABBAyCdc20_2
256:262
RRRLFQE
APC,CDC20,FZR1
0.9818
More...