DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SQESGE
Uniprot ID:
P05060
Source protein:
Secretogranin-1
Source gene:
CHGB
Class:
DEG_Kelch_Keap1_1
Location:
236:241
E3 ligase:
KEAP1
DEGRON score:
0.9781
ASA_SCORE:
98.5833
COIL:
0.8595
CONS_SCORE:
0.6043
DSS_SCORE:
0.8855
HELIX:
0.1185
FCONS_SCORE:
1.0948
RIG_SCORE:
0.458
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G240A
TCGA-13-1488
OV
TCGA
SQESGE
DEG_Kelch_Keap1_1
0.754
p.G240A
DO29438
OV
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.754
p.H249Q
TCGA-17-Z058
LUAD
TCGA
SQESGE
DEG_Kelch_Keap1_1
0.1111
p.E242D
TCGA-53-A4EZ
LUAD
TCGA
SQESGE
DEG_Kelch_Keap1_1
0.3056
p.E242D
DO45319
LUAD
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.3056
p.G240R
TCGA-EB-A5UM
SKCM
TCGA
SQESGE
DEG_Kelch_Keap1_1
0.7568
p.G240R
DO47282
SKCM
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.7568
p.G240R
SIDM00365
Small Cell Lung Carcinoma
GDSC
SQESGE
DEG_Kelch_Keap1_1
0.7568
p.G240R
ACH-002196
Lung Cancer
CCLE
SQESGE
DEG_Kelch_Keap1_1
0.7568
p.G240R
SBC-1
lung
COSMIC
SQESGE
DEG_Kelch_Keap1_1
0.7568
p.E241K
TCGA-FS-A1ZK
SKCM
TCGA
SQESGE
DEG_Kelch_Keap1_1
0.7022
p.E241K
DO37474
SKCM
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.7022
p.R232Q
DO222528
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2222
p.R232Q
DO229005
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2222
p.E247D
DO222884
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.1667
p.N248K
DO52453
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.1389
p.T243A
DO229010
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2778
p.T243A
DO229013
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2778
p.T243A
DO229016
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2778
p.T243A
DO229003
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2778
p.T243A
DO229005
COCA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.2778
p.H249Y
DO222536
MELA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.1111
p.E227V
DO222653
MELA
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.0833
p.E247K
DO37782
SKCM
ICGC
SQESGE
DEG_Kelch_Keap1_1
0.1667
p.H230R
SIDM00116
Non-Small Cell Lung Carcinoma
GDSC
SQESGE
DEG_Kelch_Keap1_1
0.1667
p.H230R
SIDM00937
Oral Cavity Carcinoma
GDSC
SQESGE
DEG_Kelch_Keap1_1
0.1667
p.H230R
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
SQESGE
DEG_Kelch_Keap1_1
0.1667
p.E233A
ACH-000025
Brain Cancer
CCLE
SQESGE
DEG_Kelch_Keap1_1
0.25
Drug responses associated with CHGB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SQESGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P05060
Secretogranin-1
DEG_Kelch_Keap1_1
236:241
SQESGE
KEAP1
0.9781
More...
Q9UQ84
Exonuclease 1
DEG_Kelch_Keap1_1
676:681
SQESGE
KEAP1
0.8002
More...