DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRDRLIHVL
Uniprot ID:
O43379
Source protein:
WD repeat-containing protein 62
Source gene:
WDR62
Class:
DEG_APCC_DBOX_1
Location:
556:564
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5378
ASA_SCORE:
26.6556
COIL:
0.4481
CONS_SCORE:
0.617
DSS_SCORE:
0.1164
HELIX:
0.0031
FCONS_SCORE:
1.4789
RIG_SCORE:
0.8464
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E546D
TCGA-06-5416
GBM
TCGA
SRDRLIHVL
DEG_APCC_DBOX_1
0.0556
p.E546D
DO10880
GBM
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.0556
p.Q574H
TCGA-86-8073
LUAD
TCGA
SRDRLIHVL
DEG_APCC_DBOX_1
0.0556
p.Q574H
DO23624
LUAD
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.0556
p.V566M
TCGA-AD-A5EJ
COAD
TCGA
SRDRLIHVL
DEG_APCC_DBOX_1
0.2778
p.V566M
DO50090
COAD
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.2778
p.R557Q
TCGA-D3-A1Q8
SKCM
TCGA
SRDRLIHVL
DEG_APCC_DBOX_1
0.7329
p.R557Q
DO37446
SKCM
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.7329
p.L560V
DO4155
BRCA
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.6765
p.V566L
DO228978
LICA
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.2778
p.G548R
DO229224
THCA
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.1111
p.R559W
SIDM02049
Pancreatic Carcinoma
GDSC
SRDRLIHVL
DEG_APCC_DBOX_1
0.7523
p.T547M
SIDM01073
Other Blood Cancers
GDSC
SRDRLIHVL
DEG_APCC_DBOX_1
0.0833
p.T547M
ACH-002242
Leukemia
CCLE
SRDRLIHVL
DEG_APCC_DBOX_1
0.0833
p.T547M
HC-1
haematopoietic_and_lymphoid_tissue
COSMIC
SRDRLIHVL
DEG_APCC_DBOX_1
0.0833
p.S554L
ACH-000841
Lung Cancer
CCLE
SRDRLIHVL
DEG_APCC_DBOX_1
0.2778
Drug responses associated with WDR62 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRDRLIHVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_APCC_DBOX_1
556:564
SRDRLIHVL
APC,CDC20,FZR1
0.5378
More...
O60336
Mitogen-activated protein kinase-binding protein 1
DEG_APCC_DBOX_1
543:551
SRDRLIHVL
APC,CDC20,FZR1
0.5285
More...