DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SRDRLIHVL
Uniprot ID:
O60336
Source protein:
Mitogen-activated protein kinase-binding protein 1
Source gene:
MAPKBP1
Class:
DEG_APCC_DBOX_1
Location:
543:551
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5285
ASA_SCORE:
28.8889
COIL:
0.4292
CONS_SCORE:
0.5827
DSS_SCORE:
0.1523
HELIX:
0.0026
FCONS_SCORE:
1.4219
RIG_SCORE:
0.8259
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R544W
TCGA-DU-6392
LGG
TCGA
SRDRLIHVL
DEG_APCC_DBOX_1
0.8634
p.A540E
TCGA-SX-A7SS
KIRP
TCGA
SRDRLIHVL
DEG_APCC_DBOX_1
0.25
p.R540Q
DO222427
BTCA
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.25
p.E559K
DO14694
HNSC
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.1111
p.E559K
DO229051
LICA
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.1111
p.A534E
DO49794
KIRP
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.0833
p.R538W
DO22237
LGG
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.1944
p.Q555H
DO233296
NACA
ICGC
SRDRLIHVL
DEG_APCC_DBOX_1
0.2222
p.A542V
SIDM00145
T-Lymphoblastic Leukemia
GDSC
SRDRLIHVL
DEG_APCC_DBOX_1
0.3056
p.A542V
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
SRDRLIHVL
DEG_APCC_DBOX_1
0.3056
p.A536V
ACH-001127
Leukemia
CCLE
SRDRLIHVL
DEG_APCC_DBOX_1
0.1389
p.A536V
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
SRDRLIHVL
DEG_APCC_DBOX_1
0.1389
Drug responses associated with MAPKBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRDRLIHVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_APCC_DBOX_1
556:564
SRDRLIHVL
APC,CDC20,FZR1
0.5378
More...
O60336
Mitogen-activated protein kinase-binding protein 1
DEG_APCC_DBOX_1
543:551
SRDRLIHVL
APC,CDC20,FZR1
0.5285
More...