DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
TKEND
Uniprot ID:
Q96JQ2
Source protein:
Calmin
Source gene:
CLMN
Class:
DEG_APCC_KENBOX_2
Location:
827:831
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9995
ASA_SCORE:
104.56
COIL:
0.8422
CONS_SCORE:
0.4612
DSS_SCORE:
0.9398
HELIX:
0.141
FCONS_SCORE:
1.3094
RIG_SCORE:
0.5634
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D831Y
TCGA-AA-3510
COAD
TCGA
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
DO7783
COAD
ICGC
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
SIDM00534
Colorectal Carcinoma
GDSC
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
ACH-000986
Colon/Colorectal Cancer
CCLE
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
HT-115
large_intestine
COSMIC
TKEND
DEG_APCC_KENBOX_2
0.6214
p.M833I
TCGA-D7-6528
STAD
TCGA
TKEND
DEG_APCC_KENBOX_2
0.2778
p.M833I
DO38547
STAD
ICGC
TKEND
DEG_APCC_KENBOX_2
0.2778
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Drug responses associated with CLMN mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of TKEND
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JQ2
Calmin
DEG_APCC_KENBOX_2
827:831
TKEND
APC,CDC20,FZR1
0.9995
More...
Q9NTI5
Sister chromatid cohesion protein PDS5 homolog B
DEG_APCC_KENBOX_2
1401:1405
TKEND
APC,CDC20,FZR1
0.9943
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