DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
TKEND
Uniprot ID:
Q96JQ2
Source protein:
Calmin
Source gene:
CLMN
Class:
DEG_APCC_KENBOX_2
Location:
827:831
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9995
ASA_SCORE:
104.56
COIL:
0.8422
CONS_SCORE:
0.4612
DSS_SCORE:
0.9398
HELIX:
0.141
FCONS_SCORE:
1.3094
RIG_SCORE:
0.5634
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D831Y
TCGA-AA-3510
COAD
TCGA
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
DO7783
COAD
ICGC
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
SIDM00534
Colorectal Carcinoma
GDSC
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
ACH-000986
Colon/Colorectal Cancer
CCLE
TKEND
DEG_APCC_KENBOX_2
0.6214
p.D831Y
HT-115
large_intestine
COSMIC
TKEND
DEG_APCC_KENBOX_2
0.6214
p.M833I
TCGA-D7-6528
STAD
TCGA
TKEND
DEG_APCC_KENBOX_2
0.2778
p.M833I
DO38547
STAD
ICGC
TKEND
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with CLMN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NTI5
Sister chromatid cohesion protein PDS5 homolog B
DEG_APCC_KENBOX_2
1401:1405
TKEND
APC,CDC20,FZR1
0.9943
More...
Q96JQ2
Calmin
DEG_APCC_KENBOX_2
827:831
TKEND
APC,CDC20,FZR1
0.9995
More...