DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TKENK
Uniprot ID:
Q86WP2
Source protein:
Vasculin
Source gene:
GPBP1
Class:
DEG_APCC_KENBOX_2
Location:
229:233
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9819
ASA_SCORE:
106.52
COIL:
0.8146
CONS_SCORE:
0.5117
DSS_SCORE:
0.6361
HELIX:
0.141
FCONS_SCORE:
1.0435
RIG_SCORE:
0.7038
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N239S
TCGA-95-7039
LUAD
TCGA
TKENK
DEG_APCC_KENBOX_2
0.1667
p.N239S
DO228949
LICA
ICGC
TKENK
DEG_APCC_KENBOX_2
0.1667
p.N239S
DO23907
LUAD
ICGC
TKENK
DEG_APCC_KENBOX_2
0.1667
p.T243I
TCGA-BR-8369
STAD
TCGA
TKENK
DEG_APCC_KENBOX_2
0.0556
p.T243I
DO47889
STAD
ICGC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.P222S
TCGA-D5-6929
COAD
TCGA
TKENK
DEG_APCC_KENBOX_2
0.1389
p.P222S
DO7870
COAD
ICGC
TKENK
DEG_APCC_KENBOX_2
0.1389
p.P229L
DO33432
PACA
ICGC
TKENK
DEG_APCC_KENBOX_2
0.7582
p.K220N
DO43306
UCEC
ICGC
TKENK
DEG_APCC_KENBOX_2
0.0833
p.T243A
SIDM00336
Melanoma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.T243A
SIDM01233
Colorectal Carcinoma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.T243A
SIDM01164
Glioma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.T243A
SIDM00665
Gastric Carcinoma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.T243A
SIDM01228
Melanoma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.T243A
SIDM01564
Colorectal Carcinoma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.0556
p.A237V
SIDM01519
Head and Neck Carcinoma
GDSC
TKENK
DEG_APCC_KENBOX_2
0.2222
p.A224V
ACH-000992
Head and Neck Cancer
CCLE
TKENK
DEG_APCC_KENBOX_2
0.1944
p.S227N
LB2241-RCC
kidney
COSMIC
TKENK
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with GPBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86WP2
Vasculin
DEG_APCC_KENBOX_2
229:233
TKENK
APC,CDC20,FZR1
0.9819
More...
Q8N6M0
Deubiquitinase OTUD6B
DEG_APCC_KENBOX_2
74:78
TKENK
APC,CDC20,FZR1
0.7864
More...