DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TKENM
Uniprot ID:
Q02880
Source protein:
DNA topoisomerase 2-beta
Source gene:
TOP2B
Class:
DEG_APCC_KENBOX_2
Location:
398:402
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7296
ASA_SCORE:
75.86
COIL:
0.6124
CONS_SCORE:
0.6825
DSS_SCORE:
0.4298
HELIX:
0.218
FCONS_SCORE:
1.2768
RIG_SCORE:
0.7911
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S391F
TCGA-AC-A23H
BRCA
TCGA
TKENM
DEG_APCC_KENBOX_2
0.1389
p.E395D
TCGA-D1-A103
UCEC
TCGA
TKENM
DEG_APCC_KENBOX_2
0.25
p.S396F
DO2401
BRCA
ICGC
TKENM
DEG_APCC_KENBOX_2
0.2778
p.L388F
DO230342
COCA
ICGC
TKENM
DEG_APCC_KENBOX_2
0.0556
p.T403A
DO50908
LICA
ICGC
TKENM
DEG_APCC_KENBOX_2
0.3056
p.E400D
DO42312
UCEC
ICGC
TKENM
DEG_APCC_KENBOX_2
0.6758
p.K399M
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
TKENM
DEG_APCC_KENBOX_2
0.8062
p.K399M
TE-4
oesophagus
COSMIC
TKENM
DEG_APCC_KENBOX_2
0.8062
p.K394M
ACH-000917
Esophageal Cancer
CCLE
TKENM
DEG_APCC_KENBOX_2
0.2222
p.K394M
TE-4
oesophagus
COSMIC
TKENM
DEG_APCC_KENBOX_2
0.2222
Drug responses associated with TOP2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TKENM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11388
DNA topoisomerase 2-alpha
DEG_APCC_KENBOX_2
377:381
TKENM
APC,CDC20,FZR1
0.8765
More...
Q02880
DNA topoisomerase 2-beta
DEG_APCC_KENBOX_2
398:402
TKENM
APC,CDC20,FZR1
0.7296
More...