DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VCLHVD
Uniprot ID:
Q9NS37
Source protein:
CREB/ATF bZIP transcription factor
Source gene:
CREBZF
Class:
LIG_APCC_ABBA_1
Location:
327:332
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.585
ASA_SCORE:
33.1333
COIL:
0.1968
CONS_SCORE:
0.8679
DSS_SCORE:
0.2284
HELIX:
0.0175
FCONS_SCORE:
1.5617
RIG_SCORE:
0.8182
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E320K
TCGA-A5-A0G1
UCEC
TCGA
VCLHVD
LIG_APCC_ABBA_1
0.1389
p.E320K
DO42472
UCEC
ICGC
VCLHVD
LIG_APCC_ABBA_1
0.1389
p.S337A
TCGA-BP-5173
KIRC
TCGA
VCLHVD
LIG_APCC_ABBA_1
0.1944
p.S337A
DO20289
KIRC
ICGC
VCLHVD
LIG_APCC_ABBA_1
0.1944
p.S337L
TCGA-FD-A3SS
BLCA
TCGA
VCLHVD
LIG_APCC_ABBA_1
0.1944
p.S337L
DO737
BLCA
ICGC
VCLHVD
LIG_APCC_ABBA_1
0.1944
p.S323A
SIDM00845
Burkitt's Lymphoma
GDSC
VCLHVD
LIG_APCC_ABBA_1
0.2222
p.S323A
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VCLHVD
LIG_APCC_ABBA_1
0.2222
p.S323A
SIDM01519
Head and Neck Carcinoma
GDSC
VCLHVD
LIG_APCC_ABBA_1
0.2222
p.S323A
ACH-000786
Lymphoma
CCLE
VCLHVD
LIG_APCC_ABBA_1
0.2222
p.S323A
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
VCLHVD
LIG_APCC_ABBA_1
0.2222
p.V327G
ACH-000238
Head and Neck Cancer
CCLE
VCLHVD
LIG_APCC_ABBA_1
0.7532
p.H330P
ACH-000997
Colon/Colorectal Cancer
CCLE
VCLHVD
LIG_APCC_ABBA_1
0.7694
p.H330P
ACH-001061
Colon/Colorectal Cancer
CCLE
VCLHVD
LIG_APCC_ABBA_1
0.7694
p.H330P
HCT-15
large_intestine
COSMIC
VCLHVD
LIG_APCC_ABBA_1
0.7694
Drug responses associated with CREBZF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCLHVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z7G8
Intermembrane lipid transfer protein VPS13B
LIG_APCC_ABBA_1
1205:1210
VCLHVD
APC,CDC20,FZR1
0.6969
More...
Q9NS37
CREB/ATF bZIP transcription factor
LIG_APCC_ABBA_1
327:332
VCLHVD
APC,CDC20,FZR1
0.585
More...