DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VCSST
Uniprot ID:
Q15596
Source protein:
Nuclear receptor coactivator 2
Source gene:
NCOA2
Class:
DEG_SPOP_SBC_1
Location:
519:523
E3 ligase:
SPOP
DEGRON score:
0.7796
ASA_SCORE:
73.98
COIL:
0.8646
CONS_SCORE:
0.5715
DSS_SCORE:
0.4475
HELIX:
0.0364
FCONS_SCORE:
1.0183
RIG_SCORE:
0.6254
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P516A
TCGA-55-A492
LUAD
TCGA
VCSST
DEG_SPOP_SBC_1
0.25
p.P516A
DO23708
LUAD
ICGC
VCSST
DEG_SPOP_SBC_1
0.25
p.S512R
TCGA-CA-6717
COAD
TCGA
VCSST
DEG_SPOP_SBC_1
0.1389
p.S512R
DO8264
COAD
ICGC
VCSST
DEG_SPOP_SBC_1
0.1389
p.P509S
TCGA-EB-A431
SKCM
TCGA
VCSST
DEG_SPOP_SBC_1
0.0556
p.P509S
DO37671
SKCM
ICGC
VCSST
DEG_SPOP_SBC_1
0.0556
p.P516L
TCGA-ER-A19E
SKCM
TCGA
VCSST
DEG_SPOP_SBC_1
0.25
p.P516L
DO47542
SKCM
ICGC
VCSST
DEG_SPOP_SBC_1
0.25
p.N531K
DO229032
LICA
ICGC
VCSST
DEG_SPOP_SBC_1
0.1111
p.P509L
DO231754
LINC
ICGC
VCSST
DEG_SPOP_SBC_1
0.0556
p.S533P
SIDM00217
Colorectal Carcinoma
GDSC
VCSST
DEG_SPOP_SBC_1
0.0556
p.S533P
ACH-000999
Colon/Colorectal Cancer
CCLE
VCSST
DEG_SPOP_SBC_1
0.0556
p.S533P
SNU-1040
large_intestine
COSMIC
VCSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with NCOA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15596
Nuclear receptor coactivator 2
DEG_SPOP_SBC_1
519:523
VCSST
SPOP
0.7796
More...
Q9ULH0
Kinase D-interacting substrate of 220 kDa
DEG_SPOP_SBC_1
1101:1105
VCSST
SPOP
0.8141
More...