DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VCSST
Uniprot ID:
Q9ULH0
Source protein:
Kinase D-interacting substrate of 220 kDa
Source gene:
KIDINS220
Class:
DEG_SPOP_SBC_1
Location:
1101:1105
E3 ligase:
SPOP
DEGRON score:
0.8141
ASA_SCORE:
70.56
COIL:
0.8586
CONS_SCORE:
0.2903
DSS_SCORE:
0.4615
HELIX:
0.0844
FCONS_SCORE:
0.8811
RIG_SCORE:
0.6548
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1112T
TCGA-A5-A0G2
UCEC
TCGA
VCSST
DEG_SPOP_SBC_1
0.1389
p.A1112T
DO232761
PBCA
ICGC
VCSST
DEG_SPOP_SBC_1
0.1389
p.A1112T
DO41235
UCEC
ICGC
VCSST
DEG_SPOP_SBC_1
0.1389
p.T1105M
TCGA-AD-A5EJ
COAD
TCGA
VCSST
DEG_SPOP_SBC_1
0.7423
p.T1105M
DO50090
COAD
ICGC
VCSST
DEG_SPOP_SBC_1
0.7423
p.P1099Q
TCGA-B0-5701
KIRC
TCGA
VCSST
DEG_SPOP_SBC_1
0.2778
p.P1099Q
DO16240
KIRC
ICGC
VCSST
DEG_SPOP_SBC_1
0.2778
p.S1096N
TCGA-BH-A0HF
BRCA
TCGA
VCSST
DEG_SPOP_SBC_1
0.1944
p.S1096N
DO1749
BRCA
ICGC
VCSST
DEG_SPOP_SBC_1
0.1944
p.Q1097H
TCGA-EE-A2GT
SKCM
TCGA
VCSST
DEG_SPOP_SBC_1
0.2222
p.Q1097H
DO37946
SKCM
ICGC
VCSST
DEG_SPOP_SBC_1
0.2222
p.S1106P
DO230309
COCA
ICGC
VCSST
DEG_SPOP_SBC_1
0.3056
p.T1105K
DO228971
LICA
ICGC
VCSST
DEG_SPOP_SBC_1
0.7306
p.G1094V
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
VCSST
DEG_SPOP_SBC_1
0.1389
p.G1094V
ACH-002272
Lymphoma
CCLE
VCSST
DEG_SPOP_SBC_1
0.1389
p.G1094V
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
VCSST
DEG_SPOP_SBC_1
0.1389
p.Y1095F
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VCSST
DEG_SPOP_SBC_1
0.1667
p.Y1095F
ACH-002256
Leukemia
CCLE
VCSST
DEG_SPOP_SBC_1
0.1667
p.Y1095F
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VCSST
DEG_SPOP_SBC_1
0.1667
p.N1108S
SIDM00477
Esophageal Carcinoma
GDSC
VCSST
DEG_SPOP_SBC_1
0.25
p.N1108S
SIDM01700
Hodgkin's Lymphoma
GDSC
VCSST
DEG_SPOP_SBC_1
0.25
p.V1101M
SIDM00596
Endometrial Carcinoma
GDSC
VCSST
DEG_SPOP_SBC_1
0.7208
p.V1101M
SIDM01774
Pancreatic Carcinoma
GDSC
VCSST
DEG_SPOP_SBC_1
0.7208
p.V1101M
SIDM01694
B-Lymphoblastic Leukemia
GDSC
VCSST
DEG_SPOP_SBC_1
0.7208
p.V1101M
HEC-1
endometrium
COSMIC
VCSST
DEG_SPOP_SBC_1
0.7208
Drug responses associated with KIDINS220 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15596
Nuclear receptor coactivator 2
DEG_SPOP_SBC_1
519:523
VCSST
SPOP
0.7796
More...
Q9ULH0
Kinase D-interacting substrate of 220 kDa
DEG_SPOP_SBC_1
1101:1105
VCSST
SPOP
0.8141
More...