DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VCTTS
Uniprot ID:
O75143
Source protein:
Autophagy-related protein 13
Source gene:
ATG13
Class:
DEG_SPOP_SBC_1
Location:
251:255
E3 ligase:
SPOP
DEGRON score:
0.9964
ASA_SCORE:
67.98
COIL:
0.7332
CONS_SCORE:
0.3925
DSS_SCORE:
0.5167
HELIX:
0.0854
FCONS_SCORE:
1.0716
RIG_SCORE:
0.7812
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T253A
TCGA-CV-5436
HNSC
TCGA
VCTTS
DEG_SPOP_SBC_1
0.7139
p.T253A
DO15006
HNSC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.7139
p.S259F
TCGA-DX-A8BP
SARC
TCGA
VCTTS
DEG_SPOP_SBC_1
0.2222
p.S259F
DO220056
SARC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.2222
p.S265L
DO219728
CESC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.0556
p.P243S
DO220881
MELA
ICGC
VCTTS
DEG_SPOP_SBC_1
0.1111
p.F256L
SIDM00600
Thyroid Gland Carcinoma
GDSC
VCTTS
DEG_SPOP_SBC_1
0.3056
p.F256L
IHH-4
thyroid
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.3056
p.G259V
ACH-000747
Lung Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.2222
p.G259V
NCI-H1703
lung
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.2222
p.V262I
ACH-002291
Embryonal Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.1389
p.V262I
NTERA-2_cl_D1
testis
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with ATG13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75143
Autophagy-related protein 13
DEG_SPOP_SBC_1
251:255
VCTTS
SPOP
0.9964
More...
Q53EP0
Fibronectin type III domain-containing protein 3B
DEG_SPOP_SBC_1
564:568
VCTTS
SPOP
0.9058
More...