DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VCTTS
Uniprot ID:
Q53EP0
Source protein:
Fibronectin type III domain-containing protein 3B
Source gene:
FNDC3B
Class:
DEG_SPOP_SBC_1
Location:
564:568
E3 ligase:
SPOP
DEGRON score:
0.9058
ASA_SCORE:
48.88
COIL:
0.353
CONS_SCORE:
0.5886
DSS_SCORE:
0.4998
HELIX:
0.0068
FCONS_SCORE:
0.906
RIG_SCORE:
0.7533
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T566R
TCGA-43-7658
LUSC
TCGA
VCTTS
DEG_SPOP_SBC_1
0.7876
p.T566R
DO27628
LUSC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.7876
p.T566R
SIDM00730
Small Cell Lung Carcinoma
GDSC
VCTTS
DEG_SPOP_SBC_1
0.7876
p.T566R
ACH-000610
Lung Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.7876
p.T566R
NCI-H2227
lung
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.7876
p.T566M
TCGA-5M-AAT6
COAD
TCGA
VCTTS
DEG_SPOP_SBC_1
0.7423
p.T566M
DO223703
COAD
ICGC
VCTTS
DEG_SPOP_SBC_1
0.7423
p.T566M
SIDM00332
Breast Carcinoma
GDSC
VCTTS
DEG_SPOP_SBC_1
0.7423
p.T566M
ACH-001819
Breast Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.7423
p.T566M
MFM-223
breast
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.7423
p.P578L
TCGA-68-7755
LUSC
TCGA
VCTTS
DEG_SPOP_SBC_1
0.0556
p.P578L
DO26512
LUSC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.0556
p.S560R
TCGA-BG-A0MG
UCEC
TCGA
VCTTS
DEG_SPOP_SBC_1
0.2222
p.S560R
DO42057
UCEC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.2222
p.K556N
TCGA-EO-A22X
UCEC
TCGA
VCTTS
DEG_SPOP_SBC_1
0.2222
p.K556N
DO43907
UCEC
ICGC
VCTTS
DEG_SPOP_SBC_1
0.2222
p.T567M
TCGA-XF-A9T8
BLCA
TCGA
VCTTS
DEG_SPOP_SBC_1
0.7423
p.T567M
DO51927
BLCA
ICGC
VCTTS
DEG_SPOP_SBC_1
0.7423
p.V564F
DO228976
LICA
ICGC
VCTTS
DEG_SPOP_SBC_1
0.7068
p.V564F
DO229009
LICA
ICGC
VCTTS
DEG_SPOP_SBC_1
0.7068
p.R577G
SIDM00537
Colorectal Carcinoma
GDSC
VCTTS
DEG_SPOP_SBC_1
0.0833
p.R577G
ACH-000982
Colon/Colorectal Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.0833
p.R577G
ACH-001345
Colon/Colorectal Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.0833
p.R577G
GP5d
large_intestine
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.0833
p.S557G
SIDM00451
T-Lymphoblastic Leukemia
GDSC
VCTTS
DEG_SPOP_SBC_1
0.1389
p.S557G
ACH-000937
Leukemia
CCLE
VCTTS
DEG_SPOP_SBC_1
0.1389
p.S557G
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
VCTTS
DEG_SPOP_SBC_1
0.1389
p.L563V
ACH-002647
Gastric Cancer
CCLE
VCTTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with FNDC3B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75143
Autophagy-related protein 13
DEG_SPOP_SBC_1
251:255
VCTTS
SPOP
0.9964
More...
Q53EP0
Fibronectin type III domain-containing protein 3B
DEG_SPOP_SBC_1
564:568
VCTTS
SPOP
0.9058
More...