DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VESTT
Uniprot ID:
Q5UIP0
Source protein:
Telomere-associated protein RIF1
Source gene:
RIF1
Class:
DEG_SPOP_SBC_1
Location:
1425:1429
E3 ligase:
SPOP
DEGRON score:
0.9633
ASA_SCORE:
100.94
COIL:
0.911
CONS_SCORE:
0.2968
DSS_SCORE:
0.691
HELIX:
0.0486
FCONS_SCORE:
0.8712
RIG_SCORE:
0.6112
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1416L
TCGA-17-Z043
LUAD
TCGA
VESTT
DEG_SPOP_SBC_1
0.0833
p.S1431N
TCGA-73-4668
LUAD
TCGA
VESTT
DEG_SPOP_SBC_1
0.7222
p.S1431N
DO23961
LUAD
ICGC
VESTT
DEG_SPOP_SBC_1
0.7222
p.R1421C
TCGA-AX-A1CE
UCEC
TCGA
VESTT
DEG_SPOP_SBC_1
0.2222
p.R1421C
TCGA-FI-A2D5
UCEC
TCGA
VESTT
DEG_SPOP_SBC_1
0.2222
p.R1421C
DO42280
UCEC
ICGC
VESTT
DEG_SPOP_SBC_1
0.2222
p.R1421C
DO41331
UCEC
ICGC
VESTT
DEG_SPOP_SBC_1
0.2222
p.R1420Q
TCGA-VS-A94X
CESC
TCGA
VESTT
DEG_SPOP_SBC_1
0.1944
p.R1420Q
DO51632
CESC
ICGC
VESTT
DEG_SPOP_SBC_1
0.1944
p.S1427P
SIDM02059
Colorectal Carcinoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.7863
p.E1430G
SIDM01090
Colorectal Carcinoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.3056
p.E1430G
ACH-000943
Colon/Colorectal Cancer
CCLE
VESTT
DEG_SPOP_SBC_1
0.3056
p.E1430G
RKO
large_intestine
COSMIC
VESTT
DEG_SPOP_SBC_1
0.3056
p.T1428I
SIDM01199
Hepatocellular Carcinoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.8189
p.T1428I
SIDM00326
Esophageal Squamous Cell Carcinoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.8189
p.T1428I
SIDM01559
Melanoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.8189
p.R1419W
SIDM00412
B-Cell Non-Hodgkin's Lymphoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.1667
p.R1419W
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
VESTT
DEG_SPOP_SBC_1
0.1667
p.R1416Q
SIDM00500
Colorectal Carcinoma
GDSC
VESTT
DEG_SPOP_SBC_1
0.0833
p.R1416Q
ACH-000959
Colon/Colorectal Cancer
CCLE
VESTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with RIF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VESTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5UIP0
Telomere-associated protein RIF1
DEG_SPOP_SBC_1
1425:1429
VESTT
SPOP
0.9633
More...
Q9UMS6
Synaptopodin-2
DEG_SPOP_SBC_1
113:117
VESTT
SPOP
0.9987
More...