DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETST
Uniprot ID:
Q13077
Source protein:
TNF receptor-associated factor 1
Source gene:
TRAF1
Class:
DEG_SPOP_SBC_1
Location:
412:416
E3 ligase:
SPOP
DEGRON score:
0.8512
ASA_SCORE:
89.1
COIL:
0.7962
CONS_SCORE:
0.6147
DSS_SCORE:
0.594
HELIX:
0.0036
FCONS_SCORE:
0.798
RIG_SCORE:
0.8348
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K402N
TCGA-EE-A2A0
SKCM
TCGA
VETST
DEG_SPOP_SBC_1
0.1667
p.L408I
TCGA-EE-A3AA
SKCM
TCGA
VETST
DEG_SPOP_SBC_1
0.2222
p.E413D
TCGA-ER-A19P
SKCM
TCGA
VETST
DEG_SPOP_SBC_1
0.5647
Drug responses associated with TRAF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13077
TNF receptor-associated factor 1
DEG_SPOP_SBC_1
412:416
VETST
SPOP
0.8512
More...
Q8WYQ9
Zinc finger CCHC domain-containing protein 14
DEG_SPOP_SBC_1
616:620
VETST
SPOP
0.9657
More...