DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
VISTT
Uniprot ID:
P08575
Source protein:
Receptor-type tyrosine-protein phosphatase C
Source gene:
PTPRC
Class:
DEG_SPOP_SBC_1
Location:
213:217
E3 ligase:
SPOP
DEGRON score:
0.7771
ASA_SCORE:
73.76
COIL:
0.4918
CONS_SCORE:
0.3442
DSS_SCORE:
0.424
HELIX:
0.0154
FCONS_SCORE:
1.0932
RIG_SCORE:
0.7578
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G210V
TCGA-61-2096
OV
TCGA
VISTT
DEG_SPOP_SBC_1
0.25
p.G210V
SIDM00296
Small Cell Lung Carcinoma
GDSC
VISTT
DEG_SPOP_SBC_1
0.25
p.G210V
ACH-002051
Lung Cancer
CCLE
VISTT
DEG_SPOP_SBC_1
0.25
p.G210V
LU-134-A
lung
COSMIC
VISTT
DEG_SPOP_SBC_1
0.25
p.A220V
TCGA-AP-A1DK
UCEC
TCGA
VISTT
DEG_SPOP_SBC_1
0.25
p.P208S
TCGA-BF-AAP2
SKCM
TCGA
VISTT
DEG_SPOP_SBC_1
0.1944
p.G210E
TCGA-D3-A3MU
SKCM
TCGA
VISTT
DEG_SPOP_SBC_1
0.25
p.G210E
TCGA-EB-A4IS
SKCM
TCGA
VISTT
DEG_SPOP_SBC_1
0.25
p.L206V
TCGA-LA-A446
LUSC
TCGA
VISTT
DEG_SPOP_SBC_1
0.1389
p.K203M
DO49760
BLCA
ICGC
VISTT
DEG_SPOP_SBC_1
0.0556
p.K203R
DO234266
ESAD
ICGC
VISTT
DEG_SPOP_SBC_1
0.0556
p.F215L
DO233796
GACA
ICGC
VISTT
DEG_SPOP_SBC_1
0.6981
p.F226Y
DO50890
LICA
ICGC
VISTT
DEG_SPOP_SBC_1
0.0833
p.A218T
DO37042
READ
ICGC
VISTT
DEG_SPOP_SBC_1
0.3056
p.A218T
DO41133
UCEC
ICGC
VISTT
DEG_SPOP_SBC_1
0.3056
p.Y210H
DO37372
READ
ICGC
VISTT
DEG_SPOP_SBC_1
0.25
p.T217S
SIDM00769
Non-Small Cell Lung Carcinoma
GDSC
VISTT
DEG_SPOP_SBC_1
0.6005
p.T217S
ACH-000733
Lung Cancer
CCLE
VISTT
DEG_SPOP_SBC_1
0.6005
p.T217S
NCI-H1838
lung
COSMIC
VISTT
DEG_SPOP_SBC_1
0.6005
p.T227R
SIDM00485
Oral Cavity Carcinoma
GDSC
VISTT
DEG_SPOP_SBC_1
0.0556
p.T227R
ACH-000794
Head and Neck Cancer
CCLE
VISTT
DEG_SPOP_SBC_1
0.0556
p.T227R
BICR22
upper_aerodigestive_tract
COSMIC
VISTT
DEG_SPOP_SBC_1
0.0556
p.A220T
LK-2
lung
COSMIC
VISTT
DEG_SPOP_SBC_1
0.25
p.K205T
SNU-C1
large_intestine
COSMIC
VISTT
DEG_SPOP_SBC_1
0.1111
p.I223S
SNU-81
large_intestine
COSMIC
VISTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PTPRC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VISTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08575
Receptor-type tyrosine-protein phosphatase C
DEG_SPOP_SBC_1
213:217
VISTT
SPOP
0.7771
More...
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
1161:1165
VISTT
SPOP
0.7988
More...