DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKENC
Uniprot ID:
A8TX70
Source protein:
Collagen alpha-5
Source gene:
COL6A5
Class:
DEG_APCC_KENBOX_2
Location:
267:271
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8315
ASA_SCORE:
80.42
COIL:
0.9184
CONS_SCORE:
0.5438
DSS_SCORE:
0.2237
HELIX:
0.019
FCONS_SCORE:
0.9552
RIG_SCORE:
0.8683
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L258I
TCGA-A6-5661
COAD
TCGA
VKENC
DEG_APCC_KENBOX_2
0.0833
p.L258I
DO8634
COAD
ICGC
VKENC
DEG_APCC_KENBOX_2
0.0833
p.Y279S
TCGA-AA-A010
COAD
TCGA
VKENC
DEG_APCC_KENBOX_2
0.1111
p.M277V
TCGA-EY-A2OM
UCEC
TCGA
VKENC
DEG_APCC_KENBOX_2
0.1667
p.M277V
DO43025
UCEC
ICGC
VKENC
DEG_APCC_KENBOX_2
0.1667
p.M272L
DO225112
BRCA
ICGC
VKENC
DEG_APCC_KENBOX_2
0.3056
p.R273Q
DO222884
COCA
ICGC
VKENC
DEG_APCC_KENBOX_2
0.2778
p.R273Q
DO33800
PACA
ICGC
VKENC
DEG_APCC_KENBOX_2
0.2778
p.R273Q
ACH-000100
Sarcoma
CCLE
VKENC
DEG_APCC_KENBOX_2
0.2778
p.R273Q
ACH-001765
Sarcoma
CCLE
VKENC
DEG_APCC_KENBOX_2
0.2778
p.S263C
DO228937
LICA
ICGC
VKENC
DEG_APCC_KENBOX_2
0.2222
p.C271R
DO45237
LIRI
ICGC
VKENC
DEG_APCC_KENBOX_2
0.719
Drug responses associated with COL6A5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENC
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8TX70
Collagen alpha-5
DEG_APCC_KENBOX_2
267:271
VKENC
APC,CDC20,FZR1
0.8315
More...
P53794
Sodium/myo-inositol cotransporter
DEG_APCC_KENBOX_2
554:558
VKENC
APC,CDC20,FZR1
0.7879
More...