DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKTTT
Uniprot ID:
A4UGR9
Source protein:
Xin actin-binding repeat-containing protein 2
Source gene:
XIRP2
Class:
DEG_SPOP_SBC_1
Location:
1347:1351
E3 ligase:
SPOP
DEGRON score:
0.8769
ASA_SCORE:
76.9
COIL:
0.5508
CONS_SCORE:
0.9307
DSS_SCORE:
0.4521
HELIX:
0.0414
FCONS_SCORE:
1.1849
RIG_SCORE:
0.8133
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1346Y
TCGA-05-4427
LUAD
TCGA
VKTTT
DEG_SPOP_SBC_1
0.3056
p.D1346Y
DO23666
LUAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.3056
p.S1361Y
TCGA-33-AASB
LUSC
TCGA
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
TCGA-AN-A046
BRCA
TCGA
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
TCGA-BK-A6W3
UCEC
TCGA
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
DO1285
BRCA
ICGC
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
DO219125
LUSC
ICGC
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
DO50076
UCEC
ICGC
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
SIDM00193
Colorectal Carcinoma
GDSC
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
ACH-000991
Colon/Colorectal Cancer
CCLE
VKTTT
DEG_SPOP_SBC_1
0.0556
p.S1361Y
SNU-81
large_intestine
COSMIC
VKTTT
DEG_SPOP_SBC_1
0.0556
p.V1342L
TCGA-78-7155
LUAD
TCGA
VKTTT
DEG_SPOP_SBC_1
0.1944
p.V1342L
DO23590
LUAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.1944
p.R1351M
TCGA-86-6562
LUAD
TCGA
VKTTT
DEG_SPOP_SBC_1
0.8632
p.R1351M
DO24013
LUAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.8632
p.V1342I
TCGA-B5-A3FC
UCEC
TCGA
VKTTT
DEG_SPOP_SBC_1
0.1944
p.V1342I
DO41871
UCEC
ICGC
VKTTT
DEG_SPOP_SBC_1
0.1944
p.H1344N
TCGA-BR-8680
STAD
TCGA
VKTTT
DEG_SPOP_SBC_1
0.25
p.H1344N
DO47769
STAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.25
p.D1360Y
TCGA-BS-A0UF
UCEC
TCGA
VKTTT
DEG_SPOP_SBC_1
0.0833
p.D1360Y
DO41488
UCEC
ICGC
VKTTT
DEG_SPOP_SBC_1
0.0833
p.H1344Y
TCGA-EE-A2MT
SKCM
TCGA
VKTTT
DEG_SPOP_SBC_1
0.25
p.H1344Y
DO220895
MELA
ICGC
VKTTT
DEG_SPOP_SBC_1
0.25
p.H1344Y
DO38051
SKCM
ICGC
VKTTT
DEG_SPOP_SBC_1
0.25
p.L1353P
DO50406
ESAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.2778
p.L1353R
DO234153
ESAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.2778
p.G1349V
DO234239
ESAD
ICGC
VKTTT
DEG_SPOP_SBC_1
0.7532
p.G1349R
DO45141
LIRI
ICGC
VKTTT
DEG_SPOP_SBC_1
0.7568
p.T1350K
DO224563
LUSC
ICGC
VKTTT
DEG_SPOP_SBC_1
0.7306
p.R1348Q
SIDM00674
Non-Cancerous
GDSC
VKTTT
DEG_SPOP_SBC_1
0.7329
p.R1348Q
SIDM00675
Breast Carcinoma
GDSC
VKTTT
DEG_SPOP_SBC_1
0.7329
p.F1354L
SIDM01220
Glioma
GDSC
VKTTT
DEG_SPOP_SBC_1
0.25
p.F1354L
ACH-002269
Brain Cancer
CCLE
VKTTT
DEG_SPOP_SBC_1
0.25
p.F1354L
LNZTA3WT4
central_nervous_system
COSMIC
VKTTT
DEG_SPOP_SBC_1
0.25
p.E1340A
SIDM01490
Small Cell Lung Carcinoma
GDSC
VKTTT
DEG_SPOP_SBC_1
0.1389
p.E1340A
ACH-000382
Lung Cancer
CCLE
VKTTT
DEG_SPOP_SBC_1
0.1389
p.V1347F
SK-MES-1
lung
COSMIC
VKTTT
DEG_SPOP_SBC_1
0.7068
p.D1346N
DMS-53
lung
COSMIC
VKTTT
DEG_SPOP_SBC_1
0.3056
p.D1346N
MDA-MB-361
breast
COSMIC
VKTTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with XIRP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
1347:1351
VKTTT
SPOP
0.8769
More...
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
1784:1788
VKTTT
SPOP
0.7189
More...