DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLPFTD
Uniprot ID:
Q9H0J4
Source protein:
Glutamine-rich protein 2
Source gene:
QRICH2
Class:
LIG_APCC_ABBA_1
Location:
360:365
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6057
ASA_SCORE:
82.35
COIL:
0.8338
CONS_SCORE:
0.2246
DSS_SCORE:
0.2843
HELIX:
0.052
FCONS_SCORE:
0.4933
RIG_SCORE:
0.7975
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D355N
TCGA-EO-A3B0
UCEC
TCGA
VLPFTD
LIG_APCC_ABBA_1
0.1944
p.D355N
DO219773
UCEC
ICGC
VLPFTD
LIG_APCC_ABBA_1
0.1944
p.L351F
TCGA-FZ-5921
PAAD
TCGA
VLPFTD
LIG_APCC_ABBA_1
0.0833
p.L351F
DO51688
PAAD
ICGC
VLPFTD
LIG_APCC_ABBA_1
0.0833
p.V354I
DO233252
GACA
ICGC
VLPFTD
LIG_APCC_ABBA_1
0.1667
p.V354I
DO229542
UTCA
ICGC
VLPFTD
LIG_APCC_ABBA_1
0.1667
p.V354A
SIDM00716
Squamous Cell Lung Carcinoma
GDSC
VLPFTD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with QRICH2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLPFTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BX63
Fanconi anemia group J protein
LIG_APCC_ABBA_1
1046:1051
VLPFTD
APC,CDC20,FZR1
0.9936
More...
Q9H0J4
Glutamine-rich protein 2
LIG_APCC_ABBA_1
360:365
VLPFTD
APC,CDC20,FZR1
0.6057
More...