DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLR
Uniprot ID:
Q14764
Source protein:
Major vault protein
Source gene:
MVP
Class:
DEG_APCC_TPR_1
Location:
891:893
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5797
ASA_SCORE:
103.7333
COIL:
0.7097
CONS_SCORE:
0.085
DSS_SCORE:
0.9527
HELIX:
0.0143
FCONS_SCORE:
0.7453
RIG_SCORE:
0.7824
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R893P
TCGA-95-7562
LUAD
TCGA
VLR
DEG_APCC_TPR_1
0.7512
p.R893P
DO51196
LUAD
ICGC
VLR
DEG_APCC_TPR_1
0.7512
p.R893C
TCGA-FI-A2D0
UCEC
TCGA
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
DO43891
UCEC
ICGC
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
SIDM01139
Pancreatic Carcinoma
GDSC
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
SIDM00262
Ewing's Sarcoma
GDSC
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
SIDM01168
Colorectal Carcinoma
GDSC
VLR
DEG_APCC_TPR_1
0.8301
p.P890L
TCGA-FI-A2D5
UCEC
TCGA
VLR
DEG_APCC_TPR_1
0.3056
p.P890L
DO41331
UCEC
ICGC
VLR
DEG_APCC_TPR_1
0.3056
p.Q881E
TCGA-Q1-A5R2
CESC
TCGA
VLR
DEG_APCC_TPR_1
0.0556
p.Q881E
DO49003
CESC
ICGC
VLR
DEG_APCC_TPR_1
0.0556
p.P883S
TCGA-WE-A8K5
SKCM
TCGA
VLR
DEG_APCC_TPR_1
0.1111
p.P883S
DO51282
SKCM
ICGC
VLR
DEG_APCC_TPR_1
0.1111
p.D885G
SIDM00032
Bladder Carcinoma
GDSC
VLR
DEG_APCC_TPR_1
0.1667
Drug responses associated with MVP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60729
Dual specificity protein phosphatase CDC14B
DEG_APCC_TPR_1
496:498
VLR
APC,CDC20,FZR1
0.9032
More...
Q14764
Major vault protein
DEG_APCC_TPR_1
891:893
VLR
APC,CDC20,FZR1
0.5797
More...