DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLR
Uniprot ID:
Q14764
Source protein:
Major vault protein
Source gene:
MVP
Class:
DEG_APCC_TPR_1
Location:
891:893
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5797
ASA_SCORE:
103.7333
COIL:
0.7097
CONS_SCORE:
0.085
DSS_SCORE:
0.9527
HELIX:
0.0143
FCONS_SCORE:
0.7453
RIG_SCORE:
0.7824
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R893C
TCGA-FI-A2D0
UCEC
TCGA
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
DO43891
UCEC
ICGC
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
SIDM01139
Pancreatic Carcinoma
GDSC
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
SIDM00262
Ewing's Sarcoma
GDSC
VLR
DEG_APCC_TPR_1
0.8301
p.R893C
SIDM01168
Colorectal Carcinoma
GDSC
VLR
DEG_APCC_TPR_1
0.8301
p.R893P
TCGA-95-7562
LUAD
TCGA
VLR
DEG_APCC_TPR_1
0.7512
p.R893P
DO51196
LUAD
ICGC
VLR
DEG_APCC_TPR_1
0.7512
p.P890L
TCGA-FI-A2D5
UCEC
TCGA
VLR
DEG_APCC_TPR_1
0.3056
p.P890L
DO41331
UCEC
ICGC
VLR
DEG_APCC_TPR_1
0.3056
p.D885G
SIDM00032
Bladder Carcinoma
GDSC
VLR
DEG_APCC_TPR_1
0.1667
p.P883S
TCGA-WE-A8K5
SKCM
TCGA
VLR
DEG_APCC_TPR_1
0.1111
p.P883S
DO51282
SKCM
ICGC
VLR
DEG_APCC_TPR_1
0.1111
p.Q881E
TCGA-Q1-A5R2
CESC
TCGA
VLR
DEG_APCC_TPR_1
0.0556
p.Q881E
DO49003
CESC
ICGC
VLR
DEG_APCC_TPR_1
0.0556
Showing 1 to 14 of 14 entries
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Drug responses associated with MVP mutations
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Sample
Cancer
Mutation (In Degron?)
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Drug
IC50
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All proteins holding degron of VLR
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60729
Dual specificity protein phosphatase CDC14B
DEG_APCC_TPR_1
496:498
VLR
APC,CDC20,FZR1
0.9032
More...
Q14764
Major vault protein
DEG_APCC_TPR_1
891:893
VLR
APC,CDC20,FZR1
0.5797
More...
Showing 1 to 2 of 2 entries
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