DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VMSTT
Uniprot ID:
Q6QHK4
Source protein:
Factor in the germline alpha
Source gene:
FIGLA
Class:
DEG_SPOP_SBC_1
Location:
190:194
E3 ligase:
SPOP
DEGRON score:
0.9664
ASA_SCORE:
78.78
COIL:
0.7442
CONS_SCORE:
0.2776
DSS_SCORE:
0.4615
HELIX:
0.0636
FCONS_SCORE:
0.8853
RIG_SCORE:
0.7072
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G180V
TCGA-44-7670
LUAD
TCGA
VMSTT
DEG_SPOP_SBC_1
0.0556
p.G180V
DO23555
LUAD
ICGC
VMSTT
DEG_SPOP_SBC_1
0.0556
p.S189N
TCGA-51-6867
LUSC
TCGA
VMSTT
DEG_SPOP_SBC_1
0.3056
p.S189N
DO26477
LUSC
ICGC
VMSTT
DEG_SPOP_SBC_1
0.3056
p.R201I
TCGA-AP-A1E0
UCEC
TCGA
VMSTT
DEG_SPOP_SBC_1
0.1389
p.R201I
DO43154
UCEC
ICGC
VMSTT
DEG_SPOP_SBC_1
0.1389
p.H188R
TCGA-CG-5726
STAD
TCGA
VMSTT
DEG_SPOP_SBC_1
0.2778
p.H188R
DO38483
STAD
ICGC
VMSTT
DEG_SPOP_SBC_1
0.2778
p.I196F
TCGA-DX-AB32
SARC
TCGA
VMSTT
DEG_SPOP_SBC_1
0.2778
p.I196F
DO220102
SARC
ICGC
VMSTT
DEG_SPOP_SBC_1
0.2778
p.H188Q
TCGA-MP-A4TI
LUAD
TCGA
VMSTT
DEG_SPOP_SBC_1
0.2778
p.H188Q
DO45420
LUAD
ICGC
VMSTT
DEG_SPOP_SBC_1
0.2778
p.S192Y
DO232826
NACA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.712
p.A185P
DO233292
NACA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.1944
p.A183T
DO71709
THCA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with FIGLA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VMSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6QHK4
Factor in the germline alpha
DEG_SPOP_SBC_1
190:194
VMSTT
SPOP
0.9664
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
623:627
VMSTT
SPOP
0.5294
More...