DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VMSTT
Uniprot ID:
Q96KW2
Source protein:
POM121-like protein 2
Source gene:
POM121L2
Class:
DEG_SPOP_SBC_1
Location:
623:627
E3 ligase:
SPOP
DEGRON score:
0.5294
ASA_SCORE:
90.26
COIL:
0.8342
CONS_SCORE:
0.5962
DSS_SCORE:
0.2531
HELIX:
0.0212
FCONS_SCORE:
0.7442
RIG_SCORE:
0.7975
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A629G
TCGA-17-Z033
LUAD
TCGA
VMSTT
DEG_SPOP_SBC_1
0.2778
p.D634Y
TCGA-A5-A2K5
UCEC
TCGA
VMSTT
DEG_SPOP_SBC_1
0.1389
p.D634Y
DO41379
UCEC
ICGC
VMSTT
DEG_SPOP_SBC_1
0.1389
p.S635Y
TCGA-AA-A010
COAD
TCGA
VMSTT
DEG_SPOP_SBC_1
0.1111
p.T626N
TCGA-RG-A7D4
LIHC
TCGA
VMSTT
DEG_SPOP_SBC_1
0.7055
p.T626N
DO52316
LIHC
ICGC
VMSTT
DEG_SPOP_SBC_1
0.7055
p.M624I
DO222817
BTCA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.6507
p.S621F
DO233098
GACA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.2778
p.T620N
DO23344
LINC
ICGC
VMSTT
DEG_SPOP_SBC_1
0.25
p.G615N
DO222632
MELA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.1111
p.G615D
DO232761
PBCA
ICGC
VMSTT
DEG_SPOP_SBC_1
0.1111
p.V622L
SIDM00715
Non-Small Cell Lung Carcinoma
GDSC
VMSTT
DEG_SPOP_SBC_1
0.3056
p.V622L
ACH-000521
Lung Cancer
CCLE
VMSTT
DEG_SPOP_SBC_1
0.3056
p.V622L
NCI-H2030
lung
COSMIC
VMSTT
DEG_SPOP_SBC_1
0.3056
p.F613L
SIDM00769
Non-Small Cell Lung Carcinoma
GDSC
VMSTT
DEG_SPOP_SBC_1
0.0556
p.F613L
ACH-000733
Lung Cancer
CCLE
VMSTT
DEG_SPOP_SBC_1
0.0556
p.F613L
NCI-H1838
lung
COSMIC
VMSTT
DEG_SPOP_SBC_1
0.0556
p.V617L
SIDM01039
Other Solid Cancers
GDSC
VMSTT
DEG_SPOP_SBC_1
0.1667
p.V617L
JAR
placenta
COSMIC
VMSTT
DEG_SPOP_SBC_1
0.1667
p.V623I
SIDM00422
Hodgkin's Lymphoma
GDSC
VMSTT
DEG_SPOP_SBC_1
0.7076
p.V623I
ACH-001203
Lymphoma
CCLE
VMSTT
DEG_SPOP_SBC_1
0.7076
p.V623I
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
VMSTT
DEG_SPOP_SBC_1
0.7076
Drug responses associated with POM121L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VMSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6QHK4
Factor in the germline alpha
DEG_SPOP_SBC_1
190:194
VMSTT
SPOP
0.9664
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
623:627
VMSTT
SPOP
0.5294
More...