DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VQSTS
Uniprot ID:
Q6XE24
Source protein:
RNA-binding motif, single-stranded-interacting protein 3
Source gene:
RBMS3
Class:
DEG_SPOP_SBC_1
Location:
297:301
E3 ligase:
SPOP
DEGRON score:
0.5818
ASA_SCORE:
38.72
COIL:
0.8036
CONS_SCORE:
0.4319
DSS_SCORE:
0.312
HELIX:
0.1144
FCONS_SCORE:
0.982
RIG_SCORE:
0.7215
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P304H
TCGA-A5-A0G2
UCEC
TCGA
VQSTS
DEG_SPOP_SBC_1
0.25
p.P291L
TCGA-B5-A1MX
UCEC
TCGA
VQSTS
DEG_SPOP_SBC_1
0.1667
p.P291T
TCGA-EE-A3AC
SKCM
TCGA
VQSTS
DEG_SPOP_SBC_1
0.1667
p.P307S
TCGA-PK-A5HB
ACC
TCGA
VQSTS
DEG_SPOP_SBC_1
0.1667
p.P307S
SIDM00660
Colorectal Carcinoma
GDSC
VQSTS
DEG_SPOP_SBC_1
0.1667
p.P307S
ACH-000985
Colon/Colorectal Cancer
CCLE
VQSTS
DEG_SPOP_SBC_1
0.1667
p.P307S
LS-411N
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.1667
p.Q296H
DO222309
DLBC
ICGC
VQSTS
DEG_SPOP_SBC_1
0.3056
p.P305L
DO234179
ESAD
ICGC
VQSTS
DEG_SPOP_SBC_1
0.2222
p.P305L
HT-115
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.2222
p.M309I
DO232761
PBCA
ICGC
VQSTS
DEG_SPOP_SBC_1
0.1111
p.P290T
DO37631
SKCM
ICGC
VQSTS
DEG_SPOP_SBC_1
0.1389
p.P290L
DO41999
UCEC
ICGC
VQSTS
DEG_SPOP_SBC_1
0.1389
p.P303H
DO41235
UCEC
ICGC
VQSTS
DEG_SPOP_SBC_1
0.2778
p.P307T
SIDM01136
Pancreatic Carcinoma
GDSC
VQSTS
DEG_SPOP_SBC_1
0.1667
p.P307T
PANC-08-13
pancreas
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.1667
p.A288T
SIDM00983
Bladder Carcinoma
GDSC
VQSTS
DEG_SPOP_SBC_1
0.0833
p.T300I
SIDM00217
Colorectal Carcinoma
GDSC
VQSTS
DEG_SPOP_SBC_1
0.7078
p.T300I
ACH-000999
Colon/Colorectal Cancer
CCLE
VQSTS
DEG_SPOP_SBC_1
0.7078
p.T300I
SNU-1040
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.7078
p.P306L
SIDM00534
Colorectal Carcinoma
GDSC
VQSTS
DEG_SPOP_SBC_1
0.1944
p.P306L
HT-115
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.1944
p.P306S
LS-411N
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.1944
p.T299I
SNU-1040
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.7078
p.P306T
PANC-08-13
pancreas
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.1944
p.M290I
COLO-741
large_intestine
COSMIC
VQSTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with RBMS3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6XE24
RNA-binding motif, single-stranded-interacting protein 3
DEG_SPOP_SBC_1
297:301
VQSTS
SPOP
0.5818
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
563:567
VQSTS
SPOP
0.8424
More...