DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSTT
Uniprot ID:
Q7Z591
Source protein:
Microtubule organization protein AKNA
Source gene:
AKNA
Class:
DEG_SPOP_SBC_1
Location:
1412:1416
E3 ligase:
SPOP
DEGRON score:
0.7681
ASA_SCORE:
58.3
COIL:
0.0586
CONS_SCORE:
0.5139
DSS_SCORE:
0.4786
HELIX:
0.9416
FCONS_SCORE:
1.0616
RIG_SCORE:
0.7259
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1410K
TCGA-E7-A6MD
BLCA
TCGA
VRSTT
DEG_SPOP_SBC_1
0.2778
p.E1410K
TCGA-GM-A2DO
BRCA
TCGA
VRSTT
DEG_SPOP_SBC_1
0.2778
p.M1419I
TCGA-EE-A2MG
SKCM
TCGA
VRSTT
DEG_SPOP_SBC_1
0.25
p.V1412I
SIDM00227
Neuroblastoma
GDSC
VRSTT
DEG_SPOP_SBC_1
0.7076
p.V1412I
GI-ME-N
autonomic_ganglia
COSMIC
VRSTT
DEG_SPOP_SBC_1
0.7076
p.A1405V
SIDM00438
B-Lymphoblastic Leukemia
GDSC
VRSTT
DEG_SPOP_SBC_1
0.1389
p.A1405V
ACH-002275
Leukemia
CCLE
VRSTT
DEG_SPOP_SBC_1
0.1389
p.A1405V
MN-60
haematopoietic_and_lymphoid_tissue
COSMIC
VRSTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with AKNA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z591
Microtubule organization protein AKNA
DEG_SPOP_SBC_1
1412:1416
VRSTT
SPOP
0.7681
More...
Q7Z7M0
Multiple epidermal growth factor-like domains protein 8
DEG_SPOP_SBC_1
703:707
VRSTT
SPOP
0.8408
More...