DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRVHIE
Uniprot ID:
P31943
Source protein:
Heterogeneous nuclear ribonucleoprotein H
Source gene:
HNRNPH1
Class:
LIG_APCC_ABBA_1
Location:
315:320
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7541
ASA_SCORE:
38.7333
COIL:
0.1158
CONS_SCORE:
0.46
DSS_SCORE:
0.2717
HELIX:
0.0063
FCONS_SCORE:
0.8445
RIG_SCORE:
0.8289
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P311L
DO233731
GACA
ICGC
VRVHIE
LIG_APCC_ABBA_1
0.2222
p.P311L
DO233903
GACA
ICGC
VRVHIE
LIG_APCC_ABBA_1
0.2222
p.H318Q
DO228986
LICA
ICGC
VRVHIE
LIG_APCC_ABBA_1
0.7582
p.H318Q
DO229027
LICA
ICGC
VRVHIE
LIG_APCC_ABBA_1
0.7582
p.Y306D
DO23240
LINC
ICGC
VRVHIE
LIG_APCC_ABBA_1
0.5278
p.I321S
SIDM01068
Non-Small Cell Lung Carcinoma
GDSC
VRVHIE
LIG_APCC_ABBA_1
0.3056
p.I321S
ACH-000562
Lung Cancer
CCLE
VRVHIE
LIG_APCC_ABBA_1
0.3056
p.I321S
HCC-78
lung
COSMIC
VRVHIE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with HNRNPH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVHIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P31943
Heterogeneous nuclear ribonucleoprotein H
LIG_APCC_ABBA_1
315:320
VRVHIE
APC,CDC20,FZR1
0.7541
More...
P52597
Heterogeneous nuclear ribonucleoprotein F
LIG_APCC_ABBA_1
315:320
VRVHIE
APC,CDC20,FZR1
0.7932
More...