DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VSTPASE
Uniprot ID:
Q5SV97
Source protein:
PGC-1 and ERR-induced regulator in muscle protein 1
Source gene:
PERM1
Class:
DEG_SCF_FBW7_2
Location:
315:321
E3 ligase:
FBXW7
DEGRON score:
0.9907
ASA_SCORE:
84.8571
COIL:
0.9457
CONS_SCORE:
0.6238
DSS_SCORE:
0.8554
HELIX:
0.0259
FCONS_SCORE:
1.4686
RIG_SCORE:
0.5746
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P307L
SIDM01090
Colorectal Carcinoma
GDSC
VSTPASE
DEG_SCF_FBW7_2
0.1111
p.P307L
SIDM00087
Plasma Cell Myeloma
GDSC
VSTPASE
DEG_SCF_FBW7_2
0.1111
p.P307L
SIDM00721
Small Cell Lung Carcinoma
GDSC
VSTPASE
DEG_SCF_FBW7_2
0.1111
p.P307L
SIDM00257
Neuroblastoma
GDSC
VSTPASE
DEG_SCF_FBW7_2
0.1111
p.M328T
SIDM00496
Thyroid Gland Carcinoma
GDSC
VSTPASE
DEG_SCF_FBW7_2
0.1389
p.M328T
HTC-C3
thyroid
COSMIC
VSTPASE
DEG_SCF_FBW7_2
0.1389
p.D325N
SIDM00217
Colorectal Carcinoma
GDSC
VSTPASE
DEG_SCF_FBW7_2
0.2222
p.D325N
SNU-1040
large_intestine
COSMIC
VSTPASE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with PERM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTPASE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SV97
PGC-1 and ERR-induced regulator in muscle protein 1
DEG_SCF_FBW7_2
300:306
VSTPASE
FBXW7
0.7255
More...
Q5SV97
PGC-1 and ERR-induced regulator in muscle protein 1
DEG_SCF_FBW7_2
315:321
VSTPASE
FBXW7
0.9907
More...
Q5SV97
PGC-1 and ERR-induced regulator in muscle protein 1
DEG_SCF_FBW7_2
330:336
VSTPASE
FBXW7
0.9907
More...
Q5SV97
PGC-1 and ERR-induced regulator in muscle protein 1
DEG_SCF_FBW7_2
345:351
VSTPASE
FBXW7
0.9907
More...
Q5SV97
PGC-1 and ERR-induced regulator in muscle protein 1
DEG_SCF_FBW7_2
373:379
VSTPASE
FBXW7
0.7956
More...