DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPAPS
Uniprot ID:
O14594
Source protein:
Neurocan core protein
Source gene:
NCAN
Class:
DEG_SCF_FBW7_1
Location:
833:838
E3 ligase:
FBXW7
DEGRON score:
0.9882
ASA_SCORE:
68.6333
COIL:
0.8245
CONS_SCORE:
0.4782
DSS_SCORE:
0.6363
HELIX:
0.028
FCONS_SCORE:
0.9418
RIG_SCORE:
0.6772
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P835S
TCGA-AB-2833
LAML
TCGA
VTPAPS
DEG_SCF_FBW7_1
0.6752
p.T825A
TCGA-BR-4363
STAD
TCGA
VTPAPS
DEG_SCF_FBW7_1
0.1111
p.T834M
TCGA-BR-6566
STAD
TCGA
VTPAPS
DEG_SCF_FBW7_1
0.7423
p.S831Y
TCGA-DK-A6AW
BLCA
TCGA
VTPAPS
DEG_SCF_FBW7_1
0.2778
p.P828L
TCGA-EE-A2MR
SKCM
TCGA
VTPAPS
DEG_SCF_FBW7_1
0.1944
p.P828S
TCGA-GF-A6C8
SKCM
TCGA
VTPAPS
DEG_SCF_FBW7_1
0.1944
p.P828H
SIDM00789
Colorectal Carcinoma
GDSC
VTPAPS
DEG_SCF_FBW7_1
0.1944
p.P828H
ACH-000997
Colon/Colorectal Cancer
CCLE
VTPAPS
DEG_SCF_FBW7_1
0.1944
p.P828H
ACH-001061
Colon/Colorectal Cancer
CCLE
VTPAPS
DEG_SCF_FBW7_1
0.1944
p.P828H
HCT-15
large_intestine
COSMIC
VTPAPS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with NCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPAPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14594
Neurocan core protein
DEG_SCF_FBW7_1
833:838
VTPAPS
FBXW7
0.9882
More...
Q9P2R6
Arginine-glutamic acid dipeptide repeats protein
DEG_SCF_FBW7_1
747:752
VTPAPS
FBXW7
0.9571
More...