DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPLTS
Uniprot ID:
P19827
Source protein:
Inter-alpha-trypsin inhibitor heavy chain H1
Source gene:
ITIH1
Class:
DEG_SCF_FBW7_1
Location:
603:608
E3 ligase:
FBXW7
DEGRON score:
0.6687
ASA_SCORE:
35.1833
COIL:
0.6967
CONS_SCORE:
0.6019
DSS_SCORE:
0.2971
HELIX:
0.1887
FCONS_SCORE:
1.3428
RIG_SCORE:
0.782
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S597L
TCGA-85-8277
LUSC
TCGA
VTPLTS
DEG_SCF_FBW7_1
0.1667
p.S597L
TCGA-AG-A02N
READ
TCGA
VTPLTS
DEG_SCF_FBW7_1
0.1667
p.Q617H
TCGA-D3-A2JC
SKCM
TCGA
VTPLTS
DEG_SCF_FBW7_1
0.0833
p.G601W
TCGA-D3-A3CE
SKCM
TCGA
VTPLTS
DEG_SCF_FBW7_1
0.2778
p.G613S
TCGA-EE-A3JD
SKCM
TCGA
VTPLTS
DEG_SCF_FBW7_1
0.1944
p.G613V
TCGA-OR-A5LJ
ACC
TCGA
VTPLTS
DEG_SCF_FBW7_1
0.1944
p.A594T
DO23120
LINC
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.0833
p.A594T
DO228138
PBCA
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.0833
p.P606L
DO220239
SARC
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.7582
p.P613H
DO37619
SKCM
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.1944
p.D599N
DO37782
SKCM
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.2222
p.T610M
DO222387
STAD
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.2778
p.N595S
DO38192
STAD
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.1111
p.P606S
DO41235
UCEC
ICGC
VTPLTS
DEG_SCF_FBW7_1
0.6752
p.P605R
SIDM01144
Gastric Carcinoma
GDSC
VTPLTS
DEG_SCF_FBW7_1
0.7512
p.P605R
NCI-SNU-5
stomach
COSMIC
VTPLTS
DEG_SCF_FBW7_1
0.7512
p.N605K
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
VTPLTS
DEG_SCF_FBW7_1
0.6918
Drug responses associated with ITIH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPLTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43586
Proline-serine-threonine phosphatase-interacting protein 1
DEG_SCF_FBW7_1
292:297
VTPLTS
FBXW7
0.9911
More...
P19827
Inter-alpha-trypsin inhibitor heavy chain H1
DEG_SCF_FBW7_1
603:608
VTPLTS
FBXW7
0.6687
More...