DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSDS
Uniprot ID:
O95359
Source protein:
Transforming acidic coiled-coil-containing protein 2
Source gene:
TACC2
Class:
DEG_SCF_FBW7_1
Location:
2245:2250
E3 ligase:
FBXW7
DEGRON score:
0.9379
ASA_SCORE:
84.6
COIL:
0.9468
CONS_SCORE:
0.4939
DSS_SCORE:
0.8019
HELIX:
0.0212
FCONS_SCORE:
0.9112
RIG_SCORE:
0.608
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2248A
TCGA-19-1386
GBM
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.7588
p.G2251R
TCGA-55-8094
LUAD
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.3056
p.G2251R
SIDM01187
Breast Carcinoma
GDSC
VTPSDS
DEG_SCF_FBW7_1
0.3056
p.P2247T
TCGA-BF-A1Q0
SKCM
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.7031
p.P2247T
TCGA-EE-A17Z
SKCM
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.7031
p.P2247T
TCGA-EE-A2GO
SKCM
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.7031
p.G2243E
TCGA-CV-A6K2
HNSC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.2778
p.T2246A
TCGA-HU-8602
STAD
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.825
p.L2254R
DO7776
COAD
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.2222
p.M2259I
DO218863
SKCA
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.1944
p.M2259I
DO37410
SKCM
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.1944
p.G2251W
SIDM01099
Neuroblastoma
GDSC
VTPSDS
DEG_SCF_FBW7_1
0.3056
p.G2251W
SK-N-FI
autonomic_ganglia
COSMIC
VTPSDS
DEG_SCF_FBW7_1
0.3056
p.G2255W
SK-N-FI
autonomic_ganglia
COSMIC
VTPSDS
DEG_SCF_FBW7_1
0.1944
p.P2238L
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
VTPSDS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with TACC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95359
Transforming acidic coiled-coil-containing protein 2
DEG_SCF_FBW7_1
2245:2250
VTPSDS
FBXW7
0.9379
More...
P42858
Huntingtin
DEG_SCF_FBW7_1
573:578
VTPSDS
FBXW7
0.8979
More...