DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSDS
Uniprot ID:
P42858
Source protein:
Huntingtin
Source gene:
HTT
Class:
DEG_SCF_FBW7_1
Location:
573:578
E3 ligase:
FBXW7
DEGRON score:
0.8979
ASA_SCORE:
77.9167
COIL:
0.8973
CONS_SCORE:
0.3074
DSS_SCORE:
0.735
HELIX:
0.063
FCONS_SCORE:
0.9527
RIG_SCORE:
0.642
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S576L
TCGA-78-7155
LUAD
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.6556
p.S576L
DO23590
LUAD
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.6556
p.Q563H
TCGA-A5-A0G2
UCEC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.0556
p.Q563H
DO41235
UCEC
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.0556
p.G585S
TCGA-A5-A0G2
UCEC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.1389
p.G585S
DO41235
UCEC
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.1389
p.N588K
TCGA-AA-3811
COAD
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.0556
p.N588K
TCGA-CV-7255
HNSC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.0556
p.N588K
DO7962
COAD
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.0556
p.N588K
DO14718
HNSC
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.0556
p.A572T
TCGA-AJ-A3BH
UCEC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.3056
p.A572T
DO41638
UCEC
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.3056
p.D587N
TCGA-AP-A1DV
UCEC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.0833
p.D587N
DO43186
UCEC
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.0833
p.E567K
TCGA-FF-8042
DLBC
TCGA
VTPSDS
DEG_SCF_FBW7_1
0.1667
p.E567K
DO222306
DLBC
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.1667
p.E567K
ACH-001970
Metastasis
CCLE
VTPSDS
DEG_SCF_FBW7_1
0.1667
p.T586I
DO222769
COCA
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.1111
p.P569H
DO233915
GACA
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.2222
p.P569S
DO232224
PBCA
ICGC
VTPSDS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with HTT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95359
Transforming acidic coiled-coil-containing protein 2
DEG_SCF_FBW7_1
2245:2250
VTPSDS
FBXW7
0.9379
More...
P42858
Huntingtin
DEG_SCF_FBW7_1
573:578
VTPSDS
FBXW7
0.8979
More...