DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSPT
Uniprot ID:
Q92870
Source protein:
Amyloid beta precursor protein binding family B member 2
Source gene:
APBB2
Class:
DEG_SCF_FBW7_1
Location:
338:343
E3 ligase:
FBXW7
DEGRON score:
0.9883
ASA_SCORE:
86.2667
COIL:
0.953
CONS_SCORE:
0.4852
DSS_SCORE:
0.7076
HELIX:
0.011
FCONS_SCORE:
1.192
RIG_SCORE:
0.58
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V339I
TCGA-85-8288
LUSC
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.7076
p.V339I
DO26963
LUSC
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.7076
p.T340M
TCGA-AA-3811
COAD
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.7423
p.T340M
DO7962
COAD
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.7423
p.S342F
TCGA-D3-A8GB
SKCM
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.7982
p.S342F
DO50280
SKCM
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.7982
p.S335P
TCGA-D7-A4YY
STAD
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.25
p.S335P
DO47733
STAD
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.25
p.S335L
TCGA-FW-A3R5
SKCM
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.25
p.P343L
TCGA-IH-A3EA
SKCM
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.7582
p.P343L
DO37667
SKCM
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.7582
p.S334L
DO37406
SKCM
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.6667
p.R332S
SIDM01129
Small Cell Lung Carcinoma
GDSC
VTPSPT
DEG_SCF_FBW7_1
0.6111
p.R332S
NCI-H524
lung
COSMIC
VTPSPT
DEG_SCF_FBW7_1
0.6111
p.R331S
NCI-H524
lung
COSMIC
VTPSPT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with APBB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92870
Amyloid beta precursor protein binding family B member 2
DEG_SCF_FBW7_1
338:343
VTPSPT
FBXW7
0.9883
More...
Q9BZB8
Cytoplasmic polyadenylation element-binding protein 1
DEG_SCF_FBW7_1
243:248
VTPSPT
FBXW7
0.9895
More...